GC-MS ANALYSIS AND IN-SILICO ADMET ANALYSIS OF THE AQUEOUS METHANOL LEAF EXTRACT OF ISODON TERNIFOLIUS (D. DON) KUDO
HTML Full TextGC-MS ANALYSIS AND IN-SILICO ADMET ANALYSIS OF THE AQUEOUS METHANOL LEAF EXTRACT OF ISODON TERNIFOLIUS (D. DON) KUDO
Gopeshor Singh Yumnam, Kunjeshwori Devi Sanjenbam *, Kiranbala Devi Hijam, Babeeta Chanu Shamjetshabam, Langlen Meinam, Sobhachandra Singh Wayenbam, Kabita Sanjenbam and Rupachandra Singh Laishram
Laboratory of Protein Biochemistry, Department of Biochemistry, Manipur University, Canchipur, Imphal, India.
ABSTRACT: Medicinal plants contain phytocompounds which are of medicinal value. Scientific evaluation of these compounds that may serve as potential drugs is important in validating the medicinal plants. The leaf extract of the medicinal plant, Isodon ternifolius (D. Don) Kudo was prepared by the maceration method using 80% aqueous methanol as the extraction solvent. The resulting extract was subjected to gas chromatography-mass spectrometry (GC-MS) analysis. The mass spectra of all the major phytocompounds obtained were compared with the standard mass spectra found in the NIST and Wiley libraries, and the phytocompounds were identified. All these identified phytocompounds were characterized biocomputationally with respect to their pharmacologically relevant physicochemical properties, viz. molecular weight, number of heavy atoms, number of heavy aromatic atoms, fraction Csp3, rotatable bond, hydrogen bond acceptor, hydrogen bond donor, molar refractivity and topological polar surface area. Further, drug-likeness, bioavailability, and ADMET properties of each of the phytocompounds were also characterised. The results obtained may be useful in further in-vitro and in-vivo experimentation that might lead to the discovery of drugs from the concerned traditional medicinal plant.
Keywords: Isodon ternifolius (D. Don) Kudo, Phytocompound, Gas chromatography-mass spectrometry (GC-MS), Drug-likeness, ADMET property
INTRODUCTION: Plants having applications in the traditional health care system are important from a human health point of view 1. They are the sources of various active phytocompounds having therapeutic properties 2. These phytocompounds may also be the precursors for the semi-synthesis of drugs currently employed in modern therapy 3.
This is mainly due to the general perception that traditional medicine has no scientific basis 4. Besides, detailed information regarding the safety of most herbal treatments vis-a-vis synthetic drug treatments is lacking 5.
Therefore, isolation and scientific evaluation of the phytocompounds from the traditional medicinal plants that may serve as potential drugs are important in validating traditional herbal medicine 6. At this juncture, it must be mentioned that the appropriate plant parts and the availability of the required quantity of the concerned traditional medicinal plant are important determinants for herbal medicine. The roots, leaves, rhizomes, barks, stems, flowers, fruits, grains, or seeds of medicinal plants are the sources of herbal medicine, and they are used in the management or therapy of various diseases 7. The phytocompounds obtained from the medicinal plants are either primary or secondary metabolites or their derivatives. The drugs derived from plant secondary metabolites contribute more than 25% of the currently available drugs 8. Systematic profiling of phytocompounds derived from traditional medicinal plants is, therefore, necessary for discovering new drugs that may help manage or cure various diseases. In the present study, GC-MS analysis of the 80% aqueous methanol leaf extract from a traditional medicinal plant Isodon ternifolius (D. Don) Kudo followed by in-silico ADMET analysis of all the identified major phytocompounds was carried out.
MATERIALS AND METHODS:
Plant Material: In the present investigation, GC-MS and ADMET analyses of the phytocompounds present in the extract from the leaf of the traditional medicinal plant, Isodon ternifolius (D.Don) Kudo were carried out. The plant, shown in Fig. 1 along with its systematic position, is a shrub mainly found in tropical and subtropical countries 9.
FIG.1: ISODON TERNIFOLIUS (D. DON) KUDO
It is locally known as “Khoiju” in Manipuri and the leaves required for the investigation were collected from the plant grown in the "Chiru Hill" of Manipur, India, and authenticated by Dr. Biseshwori Thongam, Scientist-E, the Institute of Bioresources and Sustainable Development, IBSD, Department of Biotechnology, Government of India, Takyelpat, Imphal, Manipur, India. A voucher specimen bearing No. IBSD/M-281 has been stored at the institute.
The systemic position of the plant:
Kingdom: Plantae
Phylum: Tracheophyta
Class: Magnoliopsida
Order: Lamiales
Family: Lamiaceae
Genus: Isodon
Species: Isodon ternifolius (D.Don) Kudo
Preparation of the Leaf Extract: 24 Kg of the leaves of the plant Isodon ternifolius (D.Don) Kudo at the flowering stage was collected and thoroughly washed with tap water and then shade dried at room temperature for two weeks with intermittent shuffling 10. 5 Kg of the resulting dried leaves was pulverized into a coarse powder using a kitchen blender at low speed, soaked with 36 L of 80% aqueous methanol for 3 days in a sealed round-bottom flask, and then the resulting suspension was strained through a plastic strainer. The marc obtained was collected for further extraction, and the resulting filtrate was further filtered through ordinary filter paper and then concentrated using a rotary vacuum evaporator at 40°C to collect the viscous extract. The above extraction procedure was repeated, taking the resulting marc and distillate as the extraction solvent. This repeated procedure was carried out until the extraction solvent became colourless. The concentrated viscous leaf extracts were pooled together to obtain a greenish-brown semi-solid mass weighing 583g.
GC-MS Analysis:
Sample Preparation: 80 mg of the leaf extract was dissolved in 1mL of HPLC grade methanol and filtered through a 0.2 µm membrane (PVDF) filter before it was subjected to GC-MS analysis at the Advanced Instrumentation Research Facility at Jawaharlal Nehru University, New Delhi.
GC-MS Running Conditions: 2µL of the sterile leaf extract was taken as the sample for the GC-MS analysis in a Shimadzu QP-2010 Plus instrument with a GC Capillary Column Rtx-5MS of 30 m length, 0.25 mm internal diameter, and 0.25 m film thickness. The injector port temperature, the column oven temperature, and pressure were maintained at 260°C, 50°C, and 69.0kpa, respectively. The total and column flow rates were kept constant at 16.3 and 1.21 mL/min, respectively. Helium gas was employed as the carrier gas. The total runtime was 60.32 min. The sample was scanned fully at 40 to 650 m/z, and then a GC-MS chromatogram was obtained.
Identification of Phytocompounds: The mass spectra obtained by GC-MS analysis were compared with the spectral data found in Wiley and NIST libraries using a library search program, according to Bano and Deora 11. The relative amount of each phytocompounds was determined by comparing the average peak area with the total area according to Shettimaet al (2013) 12.
ADMET Profiling of the Phytocompounds: The canonical SMILES strings of all the compounds except 8-acetyl-7A-[(acetyloxy) methyl]-5B-hydroxy-5A-methyl-3-oxo-1a, 3, 4, 5, 5a, 5b, 6, 7, 9, 10, 10a, 10b, 10c-tetradeca -hydro-7ah –cyclopental [1,2] phenanthro [9,10-b]oxiren-6-yl acetate were obtained with the help of the PubChem server.
As the structure of 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy - 5A - methyl – 3 -oxo-1a, 3, 4, 5, 5a, 5b, 6, 7, 9, 10, 10a, 10b, 10c-tetradeca -hydro-7ah –cyclopental [1,2] phenanthro [9,10-b] oxiren-6-yl acetate was not found in PubChem server, and therefore, the structure of the compound was drawn using ChemSketch, a software for drawing chemical structure.
The canonical SMILES string of the compound was then obtained. ADMET profiling of all the phytocompounds was conducted using SwissADME and pkCSM server tools.
RESULTS AND DISCUSSION: The phytocompounds present in the leaf extract from the plant Isodon ternifolius (D. Don) GC-MS detected Kudo, and their ADMET properties were analysed by in-silico method.
The corresponding total ion chromatogram is shown in Fig. 2. One hundred and four peaks characterized the chromatogram. However, these peaks were found to represent only 82 different compounds after analyzing the corresponding GC-MS data.
FIG. 2: THE TOTAL ION CHROMATOGRAM OF THE AQUEOUS METHANOL LEAF EXTRACT FROM ISODON TERNIFOLIUS (D.DON) KUDO
The concentration of each of the phytocompounds in the extract was estimated in terms of area percentage. The area percent and the retention time (RT) of all the phytocompounds detected by GC-MS are given in Table 1. Thus, the current investigation revealed the major phytocompounds present in the leaf extract of the medicinal plant, Isodon ternifolius (D. Don) Kudo.
TABLE 1: THE PHYTOCOMPOUNDS PRESENT IN AQUEOUS METHANOL LEAF EXTRACT FROM THE MEDICINAL PLANT ISODON TERNIFOLIUS (D. DON) KUDO IDENTIFIED BY GC-MS ANALYSIS
Peak | R. Time (min) | Area% | Name |
1 | 12.415 | 0.65 | 2-propenal,3–phenyl- |
2 | 13.601 | 0.37 | 2,3-dihydro-benzofuran |
3 | 13.916 | 1.01 | 3-hexene-2,5-dione |
4 | 14.210 | 0.29 | 3-hexene-2,5-dione |
5 | 15.932 | 1.04 | 2-methoxy-4-vinylphenol |
6 | 16.219 | 0.23 | 1-penten-3-one,1-phenyl- |
7 | 16.867 | 0.34 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-,trans- |
8 | 17.915 | 0.29 | 1H-Indene,1-ethylideneoctahydro-,trans- |
9 | 18.160 | 7.03 | 1,4-Diacetoxy-1,3-butadiene |
10 | 18.547 | 0.07 | 2,6-heptanedione,3-acetyl- |
11 | 19.068 | 0.19 | 1,3-decadiene-7,9-dione |
12 | 19.409 | 0.08 | 11-oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one |
13 | 19.490 | 0.21 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane |
14 | 19.669 | 0.67 | 2,6-cresotaldehyde |
15 | 20.173 | 0.69 | 2-tert-butyl-5-methyl-1,4-benzoquinone |
16 | 20.845 | 0.17 | 4-penten-2-one,3-cyclohexyl- |
17 | 22.201 | 3.42 | Aceticacid,(1,2-dimethyl-1-propenyl)ester |
18 | 22.937 | 0.14 | 1-hexen-5-on,3-methyl-4-henyl-(Diastereomeres2) |
19 | 23.204 | 0.70 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl |
20 | 23.429 | 0.26 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl |
21 | 23.848 | 0.10 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- |
22 | 24.210 | 0.24 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl |
23 | 24.312 | 0.24 | 3-methyl-3-phenyl-2-oxiranecarbonitrile |
24 | 24.615 | 0.10 | 2,5-monoformal-l-rhamnitoltriacetate |
25 | 24.773 | 0.25 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- |
26 | 24.955 | 0.63 | 3-octen-2-one,8-phenyl- |
27 | 25.118 | 1.34 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl |
28 | 25.352 | 0.16 | 3-octen-2-one,8-phenyl- |
29 | 25.757 | 0.07 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide |
30 | 25.829 | 0.18 | 3-acetylbicyclo[3.3.1]non-6-ene |
31 | 26.311 | 0.19 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol |
32 | 26.490 | 0.08 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester |
33 | 26.634 | 0.12 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one |
34 | 26.846 | 0.72 | 2,4-oxazolidinedione,5-ethyl-3,5-dimethyl- |
35 | 27.075 | 0.58 | 2-hexanol,3,3,5-trimethyl-2-(3-methylphenyl)- |
36 | 27.290 | 0.95 | Adamantane-1-carboxylic acid |
37 | 27.489 | 0.66 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol |
38 | 27.805 | 0.57 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl |
39 | 27.907 | 0.81 | 3-pentanone,2-methyl-4-phenyl- |
40 | 28.140 | 1.33 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one |
41 | 28.319 | 1.69 | Neophytadiene |
42 | 28.632 | 1.21 | Hotrienyl acetate |
43 | 28.784 | 2.65 | Hotrienyl acetate |
44 | 28.939 | 0.42 | Hotrienyl acetate |
45 | 29.192 | 0.56 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R |
46 | 29.363 | 0.18 | 5-methyl-2(2-oxo-4-heptyl)furan |
47 | 29.437 | 0.38 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne |
48 | 29.753 | 1.49 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- |
49 | 29.753 | 1.48 | 2,5-heptanedione,3,3,6-trimethyl- |
50 | 30.106 | 0.42 | Hexadecanoic, methylester |
51 | 30.378 | 0.35 | Propanoic acid, 2-methyl-3-Phenyl-2-propyl ester |
52 | 30.517 | 0.26 | 1,3-pentanedione,2,4-dimethyl-1-phenyl- |
53 | 30.583 | 0.71 | Propanoic acid, 2-methyl-, 3-phenyl-2-propyl ester |
54 | 30.797 | 0.05 | Propanoic acid, 2-methyl-, 3-phenyl-2-propyl ester |
55 | 30.882 | 0.60 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-tetradeca -hydro-cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate |
56 | 31.028 | 1.10 | Hexadecanoic acid |
57 | 31.471 | 1.74 | Propanoic acid,2-methyl-,3-phenyl-2-propenyl ester |
58 | 31.559 | 0.61 | Menthylacetate |
59 | 32.546 | 0.67 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer |
60 | 32.831 | 1.06 | 2,5-heptanedione,3,3,6-trimethyl- |
61 | 33.285 | 0.36 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester |
62 | 33.399 | 0.95 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) |
63 | 33.627 | 2.06 | 2-hexadecen-1-ol,3,7,11,15-tetramethyl-[R-[R |
64 | 33.941 | 0.66 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-tetradeca -hydro-7ahcyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate |
65 | 34.130 | 0.10 | 2-undecen-4-ol |
66 | 34.234 | 0.29 | 8-tetradecyn-1-ol |
67 | 34.570 | 0.34 | Cyclohexanol,1-methyl-,acetate |
68 | 34.698 | 0.17 | Octadecanoic acid |
69 | 35.032 | 0.28 | 1, 5-dodecadiene |
70 | 35.161 | 0.23 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) |
71 | 35.461 | 0.56 | Phytol, acetate |
72 | 36.044 | 1.18 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene |
73 | 36.266 | 0.38 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate |
74 | 36.795 | 0.20 | Methyl (9Z)-12-hydroxy-9-octadecenoate |
75 | 37.304 | 0.48 | 1-(1H-imidazol-2-yl)ethenone |
76 | 37.424 | 0.29 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester |
77 | 37.797 | 3.05 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- |
78 | 38.256 | 13.13 | 3,5-heptanedione,2,2,6,6-tetramethyl |
79 | 38.485 | 0.89 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester |
80 | 38.637 | 3.34 | 3,5-heptanedione,2,2,6,6-tetramethyl |
81 | 38.907 | 1.29 | Estran-3-one,17-(acetyloxy)-2-methyl,(2alpha,5alpha,17beta) |
82 | 39.431 | 0.14 | Nonanoic acid |
83 | 39.596 | 0.15 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol |
84 | 39.938 | 0.20 | 4, 6-nonanedione,5-(3-butanon-1-yl)-2,8-dimethyl- |
85 | 40.211 | 1.37 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methylethyl ester |
86 | 40.420 | 0.65 | 3,5-dimethyl-cyclohexanol |
87 | 40.533 | 0.63 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- |
88 | 40.736 | 3.81 | 1,2-benzenedicarboxylic acid |
89 | 40.881 | 6.12 | 3,5-heptanedione,2,2,6,6-tetramethyl |
90 | 41.328 | 2.20 | 3,5-heptanedione,2,2,6,6-tetramethyl |
91 | 43.017 | 0.65 | Hexanal,4,4-dimethyl- |
92 | 43.226 | 0.17 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- |
93 | 43.468 | 0.34 | 2-monolinolenin |
94 | 44.639 | 0.51 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone |
95 | 45.457 | 0.52 | 1-(1-heptadecynyl)cyclopentanol |
96 | 46.242 | 0.25 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one |
97 | 46.417 | 0.17 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol |
98 | 46.673 | 4.87 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate |
99 | 47.242 | 0.43 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) |
100 | 48.097 | 0.21 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone |
101 | 48.663 | 0.27 | 5-cholestene-3-ol,24-methyl- |
102 | 48.963 | 0.56 | Stigmasta-5,22-dien-3-ol |
103 | 49.193 | 0.14 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl |
104 | 49.755 | 0.56 | gamma.-sitosterol |
Total area % | 100 |
The chemical profiling of the plant reported herewith is a first of its kind as far as our knowledge is concerned based on the latest literature survey. The canonical SMILES and molecular formulae of all the 82 phytocompounds, including the 20 major compounds mentioned above are given in Table 2.
TABLE 2: THE MOLECULAR FORMULAE AND CANONICAL SMILES OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODON TERNIFOLIUS (D. DON) KUDO IDENTIFIED BY GC-MS ANALYSIS
Compd. no. | Compounds | Molecular formula | Canonical SMILES |
1 | 3–phenyl-2-propenal, | C9H8O | C1=CC=C(C=C1)C=CC=O |
2 | 2,3-dihydro-benzofuran | C8H8O | C1COC2=CC=CC=C21 |
3 | 3-hexene-2,5-dione | C6H8O2 | CC(=O)C=CC(=O)C |
4 | 2-methoxy-4-vinylphenol | C9H10O2 | COC1=C(C=CC(=C1)C=C)O |
5 | 1-penten-3-one,1-phenyl- | C11H12O | CCC(=O)C=CC1=CC=CC=C1 |
6 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-, trans- | C12H16 | C1CC=C2C(C1)C3C2=CCCC3 |
7 | 1H-Indene,1-ethylideneoctahydro-,trans- | C11H18 | CC=C1CCC2C1CCCC2 |
8 | 1,4-Diacetoxy-1,3-butadiene | C8H10O4 | CC (=O) CCC (C(=O)C) C(=O) C |
9 | 2,6-Heptanedione,3-acetyl- | C9H14O3 | CC(=O)CC(=O)CCC=CC=C |
10 | 1,3-Decadiene-7,9-dione | C10H14O2 | C1CCC23C4CC(=O)C2C3(C1)CO4 |
11 | 11-Oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one | C11H14O2 | CC1C(C1(C)C)C#CC(C)(C)C |
12 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane | C12H20 | CC1=C(C(=CC=C1)O)C=O |
13 | 2,6-cresotaldehyde | C8H8O2 | CC1=CC(=O)C(=CC1=O)C(C)(C)C |
14 | 2-tert-butyl-5-methyl-1,4-benzoquinone | C11H14O2 | CC(=O)C(C=C)C1CCCCC1 |
15 | 4-penten-2-one,3-cyclohexyl- | C11H18O | CC(=C(C)OC(=O)C)C |
16 | Aceticacid,(1,2-dimethyl-1-propenyl)ester | C7H12O2 | CCC(C1=CC=CC=C1)(C(C)C=C)O |
17 | 1-hexen-5-on,3-methyl-4-henyl- | C13H18O | CC(=O)OCC(CC1=CC=CC=C1)(COC(=O)C)[N+](=O)[O-] |
18 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl | C14H17NO6 | CC1=C2CC(CCC2(CC(C1=O)OC(=O)C)C)C(=C)CO |
19 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- | C17H24O4 | CC1(C(O1)C#N)C2=CC=CC=C2 |
20 | 3-methyl-3-phenyl-2-oxiranecarbonitrile | C10H9NO | CC1C(C(C(OC(=O)O1)COC(=O)C)OC(=O)C)OC(=O)C |
21 | 2,5-monoformal-l-rhamnitoltriacetate | C13H18O9 | CC(=O)C=CC1C(CCCC1(C)O)(C)C |
22 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- | C13H22O2 | CC(=O)C=CCCCCC1=CC=CC=C1 |
23 | 3-octen-2-one,8-phenyl- | C14H18O | CC(=O)NC1=NON=C1NC(=O)C23CC4CC(C2)CC(C4)C3 |
24 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide | C15H20N4O3 | CC(=O)C1CC2CC=CC(C2)C1 |
25 | 3-acetylbicyclo[3.3.1]non-6-ene | C11H16O | COC1=C(C=CC(=C1)C=CCO)O |
26 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol | C10H12O3 | C1CC(OC1)COC(=O)CCC2=CC=CC=C2 |
27 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester | C14H 18O3 | CC(=O)C1=CCC2C1(CCC3(C2CC=C4C3(CCC(C4)O)C)O)C |
28 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one | C21H30O3 | CCC1(C(=O)N(C(=O)O1)C)C |
29 | 2,4-oxazolidinedione,5-ethyl-3,5-dimethyl- | C7H11NO3 | CC1=CC(=CC=C1)C(C)(C(C)(C)CC(C)C)O |
30 | 2-hexanol,3,3,5-trimethyl-2-(3-methylphenyl)- | C16H26O | CC1=CCCC2(C1(C(C2)(C)O)O)C |
31 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol | C11H18O2 | CC(C)C(=O)C(C)C1=CC=CC=C1 |
32 | 3-pentanone,2-methyl-4-phenyl- | C12H16O | CC(C)CCCC(C)CCCC(C)CCCC(=C)C=C |
33 | Neophytadiene | C20H38 | O=C(C)OC(C)(C/C=C/C(C)=C)C=C |
34 | Hotrienyl acetate | C12H18O2 | CC(C)CCCC(C)CCCC(C)CCCC(=CCO)C |
35 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R | C20H40O | CCCC(CC(=O)C)C1=CC=C(O1)C |
36 | 5-methyl-2(2-oxo-4-heptyl)furan | C12H18O2 | CC(C)(C)C#CC=CC#CC(C)(C)C |
37 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne | C14H20 | CCC=CCC=CCC=CCCCCCCCC(=O)OCC(COC(=O)C)OC(=O)C |
38 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- | C25H40O6 | CC(C)C(=O)CC(C)(C)C(=O)C |
39 | 2,5-heptanedione,3,3,6-trimethyl- | C10H18O2 | CCCCCCCCCCCCCCCC(=O)OC |
40 | Hexadecanoic, methylester | C17H34O2 | CC(C)C(=O)OCC=CC1=CC=CC=C1 |
41 | Propanoic acid, 2-methyl-3-Phenyl-2-propenyl ester | C13H16O2 | CC(C)C(=O)C(C)C(=O)C1=CC=CC=C1 |
42 | 1,3-pentanedione,2,4-dimethyl-1-phenyl- | C13H16O2 | CC(=O)C1CCC2C3C(C(OC(C)=O)C(O) C12COC(C) = O) C1CCC (=O) CC1C1OC13 |
43 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-1a,3,4,5,5a,5b,6,7,9,10,10a,10b,10c-tetradeca -hydro-7ah -cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate | C24H32O8 | CCCCCCCCCCCCCCCC(=O)O |
44 | Hexadecanoic acid | C16H32O2 | CC1CCC(C(C1)OC(=O)C)C(C)C |
45 | Menthylacetate | C12H22O2 | CC(=O)CCCC1CCCCC1=C |
46 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer | C12H20O | CCCCCC=CCC=CCCCCCCCC(=O)OC |
47 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester | C19H34O2 | CCC=CCC=CCC=CCCCCCCCC(=O)OC |
48 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) | C19H32O2 | CCCCCCCC(C=CC)O |
49 | 2-Undecen-4-ol | C11H22O | CCCCCC#CCCCCCCCO |
50 | 8-tetradecyn-1-ol | C14H26O | CC(=O)OC1(CCCCC1)C |
51 | Cyclohexanol,1-methyl-,acetate | C9H16O2 | CCCCCCCCCCCCCCCCCC(=O)O |
52 | Octadecanoic acid | C18H36O2 | CCCCCCC=CCCC=C |
53 | 1, 5-dodecadiene | C12H22 | CC1CC2C(CCC3C2CCC4(C3CCC4OC(=O)C)C)CC1=O |
54 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) | C21H32O3 | CC(C)CCCC(C)CCCC(C)CCCC(=CCOC(=O)C)C |
55 | Phytol,acetate | C22H42O2 | CC(=O)OC(C=CC=CC=CC=C(C=O)C=O)OC(=O)C |
56 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene | C15H16O6 | CC(=O)OCCCCCCCCCCC=CC1CO1 |
57 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate | C16H28O3 | CCCCCCC(CC=CCCCCCCCC(=O)OC)O |
58 | Methyl (9Z)-12-hydroxy-9-octadecenoate | C19H36O3 | CC(=O)C1=NC=CN1 |
59 | 1-(1H-imidazol-2-yl)ethanone | C5H6N2O | CC(=O)C(CC1=CC=C(C=C1)OC(=O)C)NC(=O)C |
60 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester | C14H17NO4 | CC(=CC(=O)O)C(C)(C)C(=O)C |
61 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- | C9H14O3 | CC(C)C(=O)C(C)C(=O)C(C)(C)C |
62 | 3,5-heptanedione,2,2,6,6-tetramethyl | C11H20O2 | CCCCCCCCC(=O)O |
63 | Nonanoic acid | C9H18O2 | CC(=O)OC1C(COC1COC)OC |
64 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol | C9H16O5 | CC(C)CC(=O)C(CCC(=O)C)C(=O)CC(C)C |
65 | 4, 6-nonanedione,5-(3-butanon-1-yl)-2,8-dimethyl- | C15H26O3 | CC(CC1CC(=O)N(O1)C(=O)C)OC(=O)C |
66 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methyl ethyl ester | C10H15NO5 | CC1CC(CC(C1)O)C |
67 | 3,5-dimethyl-cyclohexanol | C8H16O | CC(C)CC(=O)C=C(C(=CC(=O)CC(C)C)O)O |
68 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- | C14H22O4 | C1=CC=C(C(=C1)C(=O)O)C(=O)O |
69 | 1,2-benzenedicarboxylic acid | C8H6O4 | CCC(C)(C)CCC=O |
70 | Hexanal,4,4-dimethyl- | C8H16O | CCC=CCC=CCC=CCCCCCCCC(=O)OC(CO)CO |
71 | 2-monolinolenin | C21H36O4 | CC1CC(C2(C1C3CC4C5(O4)CCC(CC5(C3CC2)C)O)C)C(=O)C |
72 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone | C22H34O3 | CCCCCCCCCCCCCCCC#CC1(CCCC1)O |
73 | 1-(1-heptadecynyl)cyclopentanol | C22H40O | CC1CCC2C3CCC4CC(CCC4(C3CCC2(C1=O)C)C)OC(=O)C |
74 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one | C23H36O3 | CC1CCC23CCCC2C1(C(CC(CC3C)(C)C=C)O)C |
75 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol | C20H34O | CC(=O)OC1CCC2C1(CCC3C2C(=O)C=C4C3(CCC(=O)C4(C)C)C)C |
76 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate | C23H32O4 | CC(C)C(C)C=CC(C)C1CCC2C1(CC3C4(C2=CCC5C4(CCC(C5)OC(=O)C)C)O3)C |
77 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) | C30H46O3 | CC(=O)CCC12CC1(CCCC2(C)C)C |
78 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone | C14H24O | CC(C)C(C)CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C |
79 | 5-cholestene-3-ol,24-methyl- | C28H48O | CCC(C=CC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C |
80 | Stigmasta-5,22-dien-3-ol | C29H48O | CC1CCC2C13CCC(C(C3)C2(C)C)(C)O |
81 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl | C15H26O | CCC(CCC(C)C1CCC2C1(CCC3C2CC=C4C3(CCC(C4)O)C)C)C(C)C |
82 | Gamma.-sitosterol | C29H50O | C1=CC=C(C=C1)C=CC=O |
*Simplified molecular-input line-entry system (SMILES) is a chemical notation that allows a user to represent a chemical structure of an organic compound in a way that can be used by the computer.
In the current investigation ADMET analysis of all the phytocompounds was carried out using SwissADME and pkCSM server tools. The in-silico ADMET analysis was conducted as it saves time and cost of drug discovery and development. It also provided dependable data very quickly, reducing the chance of failure in the clinical trial phase. These could predict the pharmacokinetic properties of various compounds 13, 14. The physicochemical properties of the phytocompounds identified by GC-MS analysis of the extract were evaluated using the SwissADME server tool. The results of the evaluation are given in Table 3.
TABLE 3: PHYSICOCHEMICAL PROPERTIES OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODON TERNIFOLIUS (D. DON) KUDO
Compd. no. | Compounds | MW | HA | AHA | FC | RB | HBA | HBD | MR | TPSA |
1 | 3–phenyl- 2-propenal | 132.16 | 10 | 6 | 0.00 | 2 | 1 | 0 | 41.54 | 17.07 |
2 | 2,3-dihydro-benzofuran | 120.15 | 9 | 6 | 0.25 | 0 | 1 | 0 | 35.79 | 9.23 |
3 | 3-hexene-2,5-dione | 112.13 | 8 | 0 | 0.33 | 2 | 2 | 0 | 30.88 | 34.14 |
4 | 2-methoxy-4-vinylphenol | 150.17 | 11 | 6 | 0.11 | 2 | 2 | 1 | 45.05 | 29.46 |
5 | 1-penten-3-one,1-phenyl- | 160.21 | 12 | 6 | 0.18 | 3 | 1 | 0 | 51.15 | 17.07 |
6 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-,trans- | 160.26 | 12 | 0 | 0.67 | 0 | 0 | 0 | 52.51 | 0.00 |
7 | 1H-Indene,1-ethylideneoctahydro, trans- | 150.26 | 11 | 0 | 0.82 | 0 | 0 | 0 | 50.29 | 0.00 |
8 | 1,4-Diacetoxy-1,3-butadiene | 170.16 | 12 | 0 | 0.25 | 5 | 4 | 0 | 42.19 | 52.60 |
9 | 2,6-heptanedione,3-acetyl- | 170.21 | 12 | 0 | 0.67 | 5 | 3 | 0 | 45.98 | 51.21 |
10 | 1,3-decadiene-7,9-dione | 166.22 | 12 | 0 | 0.40 | 6 | 2 | 0 | 49.64 | 34.14 |
11 | 11-oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one | 178.23 | 13 | 0 | 0.91 | 0 | 2 | 0 | 47.30 | 26.30 |
12 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane | 164.29 | 12 | 0 | 0.83 | 0 | 0 | 0 | 55.33 | 0.00 |
13 | 2,6-cresotaldehyde | 136.15 | 10 | 6 | 0.12 | 1 | 2 | 1 | 38.82 | 37.30 |
14 | 2-tert-butyl-5-methyl-1,4-benzoquinone | 178.23 | 13 | 0 | 0.45 | 1 | 2 | 0 | 52.07 | 34.14 |
15 | 4-penten-2-one,3-cyclohexyl- | 166.26 | 12 | 0 | 0.73 | 3 | 1 | 0 | 52.60 | 17.07 |
16 | Aceticacid,(1,2-dimethyl-1-propenyl)ester | 128.17 | 9 | 0 | 0.57 | 2 | 2 | 0 | 36.57 | 26.30 |
17 | 1-hexen-5-on,3-methyl-4-henyl- | 190.28 | 14 | 6 | 0.38 | 4 | 1 | 1 | 60.82 | 20.23 |
18 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl | 295.29 | 21 | 6 | 0.43 | 9 | 6 | 0 | 75.77 | 98.42 |
19 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- | 292.37 | 21 | 0 | 0.65 | 4 | 4 | 1 | 81.04 | 63.60 |
20 | 3-methyl-3-phenyl-2-oxiranecarbonitrile | 159.18 | 12 | 6 | 0.30 | 1 | 2 | 0 | 44.43 | 36.32 |
21 | 2,5-monoformal-l-rhamnitoltriacetate | 318.28 | 22 | 0 | 0.69 | 7 | 9 | 0 | 69.11 | 114.43 |
22 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- | 210.31 | 15 | 0 | 0.77 | 2 | 2 | 1 | 63.16 | 37.30 |
23 | 3-octen-2-one,8-phenyl- | 202.29 | 15 | 6 | 0.36 | 6 | 1 | 0 | 64.78 | 17.07 |
24 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide | 304.34 | 22 | 5 | .73 | 5 | 5 | 2 | 79.58 | 97.12 |
25 | 3-acetylbicyclo[3.3.1]non-6-ene | 164.24 | 12 | 0 | 0.73 | 1 | 1 | 0 | 50.49 | 17.07 |
26 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol | 180.20 | 13 | 6 | 0.20 | 3 | 3 | 2 | 51.02 | 49.69 |
27 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester | 234.29 | 17 | 6 | 0.50 | 6 | 3 | 0 | 65.31 | 35.53 |
28 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one | 330.46 | 24 | 0 | 0.76 | 1 | 3 | 2 | 95.70 | 57.53 |
29 | 2,4-oxazolidinedione,5-ethyl-3,5-dimethyl- | 157.17 | 11 | 0 | 0.71 | 1 | 3 | 0 | 42.37 | 46.61 |
30 | 2-hexanol,3,3,5-trimethyl-2-(3-methylphenyl)- | 234.38 | 17 | 6 | 0.62 | 4 | 1 | 1 | 75.61 | 20.23 |
31 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol | 182.26 | 13 | 0 | 0.82 | 0 | 2 | 2 | 52.43 | 40.46 |
32 | 3-pentanone,2-methyl-4-phenyl- | 176.25 | 13 | 6 | 0.42 | 3 | 1 | 0 | 55.64 | 17.07 |
33 | Neophytadiene | 278.52 | 20 | 0 | 0.80 | 0 | 0 | 0 | 97.31 | 0.00 |
34 | Hotrienyl acetate | 194.27 | 14 | 0 | 0.42 | 6 | 2 | 0 | 59.70 | 26.30 |
35 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R | 296.53 | 21 | 0 | 0.90 | 13 | 1 | 1 | 98.94 | 20.23 |
36 | 5-methyl-2(2-oxo-4-heptyl)furan | 194.27 | 14 | 5 | 0.58 | 5 | 2 | 0 | 57.68 | 30.21 |
37 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne | 188.31 | 14 | 0 | 0.57 | 0 | 0 | 0 | 64.74 | 0.00 |
38 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- | 436.58 | 31 | 0 | 0.64 | 21 | 6 | 0 | 124.72 | 78.90 |
39 | 2,5-heptanedione,3,3,6-trimethyl- | 170.25 | 12 | 0 | .80 | 4 | 2 | 0 | 50.32 | 34.14 |
40 | Hexadecanoic, methylester | 270.45 | 19 | 0 | 0.94 | 15 | 2 | 0 | 85.12 | 26.30 |
41 | Propanoic acid, 2-methyl-3-Phenyl-2-propenyl ester | 204.26 | 15 | 6 | 0.31 | 5 | 2 | 0 | 61.85 | 26.30 |
42 | 1,3-pentanedione,2,4-dimethyl-1-phenyl- | 204.26 | 15 | 6 | 0.38 | 4 | 2 | 0 | 60.87 | 34.14 |
43 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-1a,3,4,5,5a,5b,6,7,9,10,10a,10b,10c-tetradeca -hydro-7ah -cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate | 448.51 | 32 | 0 | 0.83 | 6 | 8 | 1 | 111.87 | 119.50 |
44 | Hexadecanoic acid | 256.42 | 18 | 0 | 0.94 | 14 | 2 | 1 | 80.80 | 37.30 |
45 | Menthylacetate | 198.30 | 14 | 0 | 0.92 | 3 | 2 | 0 | 58.97 | 26.30 |
46 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer | 180.29 | 13 | 0 | 0.75 | 4 | 1 | 0 | 57.41 | 17.07 |
47 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester | 294.47 | 12 | 0 | 0.74 | 15 | 2 | 0 | 93.78 | 26.30 |
48 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) | 292.46 | 21 | 0 | 0.63 | 14 | 2 | 0 | 93.31 | 26.30 |
49 | 2-Undecen-4-ol | 170.29 | 12 | 0 | 0.82 | 7 | 1 | 1 | 55.68 | 20.23 |
50 | 8-tetradecyn-1-ol | 210.36 | 15 | 0 | 0.86 | 9 | 1 | 1 | 68.74 | 20.23 |
51 | Cyclohexanol,1-methyl-,acetate | 156.22 | 11 | 0 | 0.89 | 2 | 2 | 0 | 44.59 | 26.30 |
52 | Octadecanoic acid | 284.48 | 20 | 0 | 0.94 | 16 | 2 | 1 | 90.41 | 37.30 |
53 | 1, 5-dodecadiene | 166.30 | 12 | 0 | 0.67 | 8 | 0 | 0 | 58.85 | 0.00 |
54 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) | 332.48 | 24 | 0 | 0.90 | 2 | 3 | 0 | 95.83 | 43.37 |
55 | Phytol,acetate | 338.57 | 20 | 0 | 0.86 | 15 | 2 | 0 | 108.68 | 26.30 |
56 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene | 108.68 | 21 | 0 | 0.20 | 10 | 6 | 0 | 75.29 | 86.74 |
57 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate | 268.39 | 19 | 0 | 0.81 | 13 | 3 | 0 | 78.81 | 38.83 |
58 | Methyl (9Z)-12-hydroxy-9-octadecenoate | 312.49 | 22 | 0 | 0.84 | 16 | 3 | 1 | 95.42 | 46.53 |
59 | 1-(1H-imidazol-2-yl)ethanone | 110.11 | 8 | 5 | 0.20 | 1 | 2 | 1 | 28.78 | 45.75 |
60 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester | 263.29 | 19 | 6 | 0.36 | 7 | 4 | 1 | 70.14 | 72.47 |
61 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- | 170.21 | 12 | 0 | 0.56 | 3 | 3 | 1 | 46.61 | 54.37 |
62 | 3,5-heptanedione,2,2,6,6-tetramethyl | 184.28 | 13 | 0 | 0.82 | 4 | 2 | 0 | 55.13 | 34.14 |
63 | Nonanoic acid | 158.24 | 11 | 0 | 0.89 | 7 | 2 | 1 | 47.15 | 37.30 |
64 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol | 204.22 | 14 | 0 | 0.89 | 5 | 5 | 0 | 47.80 | 53.99 |
65 | 4, 6-nonanedione,5-(3-butanon-1-yl)-2,8-dimethyl- | 254.37 | 18 | 0 | 0.80 | 9 | 3 | 0 | 74.82 | 51.21 |
66 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methyl ethyl ester | 229.23 | 16 | 0 | 0.70 | 5 | 5 | 0 | 57.65 | 72.91 |
67 | 3,5-dimethyl-cyclohexanol | 128.21 | 9 | 0 | 1.0 | 0 | 1 | 1 | 39.62 | 20.23 |
68 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- | 254.32 | 18 | 0 | 0.57 | 7 | 4 | 2 | 72.01 | 74.60 |
69 | 1,2-benzenedicarboxylic acid | 166.13 | 12 | 6 | 0.00 | 2 | 4 | 2 | 40.36 | 74.60 |
70 | Hexanal,4,4-dimethyl- | 128.21 | 9 | 0 | 0.88 | 4 | 1 | 0 | 40.51 | 17.07 |
71 | 2-monolinolenin | 352.51 | 25 | 0 | 0.67 | 17 | 4 | 2 | 105.25 | 66.76 |
72 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone | 346.50 | 25 | 0 | 0.95 | 1 | 3 | 1 | 99.26 | 49.83 |
73 | 1-(1-heptadecynyl)cyclopentanol | 320.55 | 23 | 0 | 0.91 | 13 | 1 | 1 | 105.12 | 20.23 |
74 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one | 360.53 | 26 | 0 | 0.91 | 2 | 3 | 0 | 105.18 | 43.37 |
75 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol | 290.48 | 21 | 0 | 0.90 | 1 | 1 | 1 | 91.82 | 20.23 |
76 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate | 372.50 | 27 | 0 | 0.78 | 2 | 4 | 0 | 104.65 | 60.44 |
77 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) | 454.68 | 33 | 0 | 0.83 | 6 | 3 | 0 | 136.69 | 38.83 |
78 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone | 208.34 | 15 | 0 | 0.93 | 3 | 1 | 0 | 64.60 | 17.07 |
79 | 5-cholestene-3-ol,24-methyl- | 400.68 | 29 | 0 | 0.93 | 5 | 1 | 1 | 128.42 | 20.23 |
80 | Stigmasta-5,22-dien-3-ol | 412.69 | 30 | 0 | 0.86 | 5 | 1 | 1 | 132.75 | 20.23 |
81 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl | 222.37 | 16 | 0 | 1.0 | 0 | 1 | 1 | 68.56 | 20.23 |
82 | gamma.-sitosterol | 414.71 | 30 | 0 | 0.93 | 6 | 1 | 1 | 133.23 | 20.23 |
*MW- Molecular Weight, HA- Number of Heavy Atoms, AHA- Number of Aromatic Heavy Atoms, FC- Fraction Csp3, RB- Rotatable Bond, HBA- Hydrogen Bond Acceptor, HBD- Hydrogen Bond Donor, MR- Molar Refractivity, TPSA- Topological Polar Surface Area.
Molecular weight (MW), number of heavy atoms (HA), number of heavy atoms in aromatic ring (AHA), number of rotatable bonds (RB), number of hydrogen bond acceptors (HBA), number of hydrogen bond donors (HBD), molar refractivity (MR), and topological surface area (TPSA) are included in the table. The molecular weight of the compounds varies from 110.11 to 454.68 Da. Using the SwissADME server tool, the hydrophobicity characteristics of the compounds were evaluated, and the result is given in Table 4.
TABLE 4: LIPOPHILICITY CHARACTERISTICS OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Compd. no. | Compounds | iLOGP | XLOGP3 | WLOGP | MLOGP | SILICOS-IT | Consensus Log Po/w |
1 | 3–phenyl-2-propenal | 1.65 | 1.90 | 1.79 | 2.01 | 2.48 | 1.97 |
2 | 2,3-dihydro-benzofuran | 1.89 | 2.14 | 1.62 | 1.75 | 2.62 | 2.00 |
3 | 3-hexene-2,5-dione | 1.43 | -0.13 | 0.72 | 0.26 | 0.90 | 0.64 |
4 | 2-methoxy-4-vinylphenol | 2.14 | 2.81 | 1.93 | 1.71 | 2.13 | 2.14 |
5 | 1-penten-3-one,1-phenyl- | 2.26 | 2.54 | 2.57 | 2.61 | 3.03 | 2.60 |
6 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-,trans- | 2.76 | 3.09 | 3.45 | 3.84 | 3.16 | 3.26 |
7 | 1H-Indene,1-ethylideneoctahydro-,trans- | 2.81 | 3.75 | 3.53 | 4.58 | 3.30 | 3.59 |
8 | 1,4-Diacetoxy-1,3-butadiene | 2.05 | 0.65 | 1.14 | 0.75 | 0.81 | 1.08 |
9 | 2,6-heptanedione,3-acetyl- | 1.20 | -0.15 | 1.15 | 0.38 | 1.80 | 0.88 |
10 | 1,3-decadiene-7,9-dione | 1.82 | 1.48 | 2.06 | 1.47 | 2.60 | 1.89 |
11 | 11-oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one | 2.04 | 0.98 | 1.53 | 1.67 | 2.58 | 1.76 |
12 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane | 3.24 | 4.17 | 3.41 | 4.86 | 3.24 | 3.78 |
13 | 2,6-cresotaldehyde | 1.67 | 1.94 | 1.51 | 1.12 | 1.96 | 1.64 |
14 | 2-tert-butyl-5-methyl-1,4-benzoquinone | 2.13 | 2.59 | 2.06 | 1.37 | 2.52 | 2.13 |
15 | 4-penten-2-one,3-cyclohexyl- | 2.52 | 3.47 | 2.96 | 2.49 | 3.13 | 2.91 |
16 | Aceticacid,(1,2-dimethyl-1-propenyl)ester | 2.19 | 1.84 | 1.86 | 1.52 | 1.01 | 1.68 |
17 | 1-hexen-5-on,3-methyl-4-henyl- | 2.69 | 3.22 | 3.00 | 3.25 | 3.30 | 3.09 |
18 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl | 2.36 | 1.62 | 1.37 | 1.15 | 0.50 | 1.40 |
19 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- | 2.43 | 2.57 | 2.56 | 2.02 | 3.17 | 2.55 |
20 | 3-methyl-3-phenyl-2-oxiranecarbonitrile | 2.00 | 1.39 | 1.72 | 1.08 | 2.56 | 1.75 |
21 | 2,5-monoformal-l-rhamnitoltriacetate | 1.98 | 0.60 | 0.34 | -0.16 | 0.19 | 0.59 |
22 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- | 2.52 | 2.24 | 2.71 | 2.11 | 2.94 | 2.50 |
23 | 3-octen-2-one,8-phenyl- | 2.88 | 3.71 | 3.54 | 3.42 | 4.17 | 3.55 |
24 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide | 1.94 | 1.35 | 1.80 | 2.01 | 1.15 | 1.65 |
25 | 3-acetylbicyclo[3.3.1]non-6-ene | 2.24 | 2.15 | 2.57 | 2.49 | 2.28 | 2.35 |
26 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol | 2.16 | 1.79 | 1.30 | 1.13 | 1.71 | 1.62 |
27 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester | 2.92 | 2.41 | 2.34 | 2.12 | 3.24 | 2.61 |
28 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one | 2.87 | 2.50 | 3.55 | 3.07 | 3.38 | 3.07 |
29 | 2,4-oxazolidinedione,5-ethyl-3,5-dimethyl- | 1.84 | 0.83 | 0.38 | 0.21 | 0.68 | 0.79 |
30 | 2-hexanol,3,3,5-trimethyl-2-(3-methylphenyl)- | 3.25 | 4.50 | 4.17 | 4.10 | 4.31 | 4.07 |
31 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol | 2.20 | 0.71 | 1.62 | 1.67 | 2.01 | 1.64 |
32 | 3-pentanone,2-methyl-4-phenyl- | 2.47 | 3.16 | 3.02 | 2.97 | 3.24 | 2.97 |
33 | Neophytadiene | 5.05 | 9.62 | 7.17 | 6.21 | 7.30 | 7.07 |
34 | Hotrienyl acetate | 3.06 | 3.36 | 3.02 | 2.86 | 2.97 | 3.05 |
35 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R | 4.71 | 8.19 | 6.36 | 5.25 | 6.57 | 6.22 |
36 | 5-methyl-2(2-oxo-4-heptyl)furan | 2.78 | 2.57 | 3.45 | 1.70 | 3.65 | 2.83 |
37 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne | 3.88 | 5.07 | 3.80 | 5.58 | 3.84 | 4.44 |
38 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- | 4.97 | 6.07 | 5.61 | 4.00 | 6.98 | 5.53 |
39 | 2,5-heptanedione,3,3,6-trimethyl- | 2.27 | 1.51 | 2.22 | 1.66 | 2.29 | 1.99 |
40 | Hexadecanoic, methylester | 4.41 | 7.38 | 5.64 | 4.44 | 5.84 | 5.54 |
41 | Propanoic acid, 2-methyl-3-Phenyl-2-propenyl ester | 2.98 | 3.30 | 2.79 | 3.04 | 3.16 | 3.06 |
42 | 3-pentanedione,2,4-dimethyl-1-phenyl- | 2.02 | 3.15 | 2.73 | 2.23 | 3.17 | 2.66 |
43 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-1a,3,4,5,5a,5b,6,7,9,10,10a,10b,10c-tetradeca -hydro-7ah -cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate | 2.99 | 0.34 | 1.46 | 1.17 | 2.02 | 1.60 |
44 | Hexadecanoic acid | 3.85 | 7.17 | 5.55 | 4.19 | 5.25 | 5.20 |
45 | Menthylacetate | 2.73 | 4.00 | 3.01 | 2.76 | 2.49 | 3.00 |
46 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer | 2.69 | 2.96 | 3.49 | 2.77 | 3.67 | 3.12 |
47 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester | 4.61 | 6.82 | 5.97 | 4.70 | 6.36 | 5.69 |
48 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) | 4.94 | 6.29 | 5.75 | 4.61 | 6.18 | 5.55 |
49 | 2-Undecen-4-ol
|
3.16 | 3.87 | 3.28 | 2.99 | 3.10 | 3.28 |
50 | 8-tetradecyn-1-ol | 3.80 | 5.23 | 3.98 | 3.80 | 4.45 | 4.25 |
51 | Cyclohexanol,1-methyl-,acetate | 2.48 | 2.11 | 2.27 | 1.88 | 2.24 | 2.20 |
52 | Octadecanoic acid | 4.30 | 8.23 | 6.33 | 4.67 | 6.13 | 5.93 |
53 | 1, 5-dodecadiene | 3.57 | 5.27 | 4.48 | 4.23 | 4.25 | 4.36 |
54 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) | 3.19 | 4.52 | 4.39 | 3.98 | 3.64 | 3.94 |
55 | Phytol,acetate | 5.01 | 8.76 | 6.93 | 5.47 | 7.19 | 6.67 |
56 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene | 2.65 | 1.50 | 1.43 | 1.17 | 2.61 | 1.87 |
57 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate | 3.80 | 4.51 | 4.02 | 2.81 | 5.03 | 4.03 |
58 | Methyl (9Z)-12-hydroxy-9-octadecenoate | 4.45 | 5.92 | 5.17 | 3.92 | 5.80 | 5.05 |
59 | 1-(1H-imidazol-2-yl)ethanone | 1.04 | 0.08 | 0.61 | -1.03 | 1.26 | 0.39 |
60 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester | 2.07 | 1.04 | 1.25 | 1.34 | 2.24 | 1.59 |
61 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- | 1.29 | 1.42 | 1.63 | 1.19 | 1.16 | 1.34 |
62 | 3,5-heptanedione,2,2,6,6-tetramethyl | 2.07 | 2.81 | 2.46 | 1.95 | 2.55 | 2.37 |
63 | Nonanoic acid | 2.30 | 3.42 | 2.82 | 2.28 | 2.20 | 2.60 |
64 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol | 1.83 | -0.35 | -0.02 | -0.68 | 0.51 | 0.26 |
65 | 4, 6-nonanedione,5-(3-butanon-1-yl)-2,8-dimethyl- | 2.70 | 2.38 | 3.20 | 2.05 | 4.05 | 2.88 |
66 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methyl ethyl ester | 1.53 | 0.00 | 0.03 | 0.64 | 0.47 | 0.53 |
67 | 3,5-dimethyl-cyclohexanol | 2.17 | 2.23 | 1.80 | 1.83 | 1.56 | 1.92 |
68 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- | 2.59 | 3.02 | 3.10 | 0.85 | 2.41 | 2.39 |
69 | 1,2-benzenedicarboxylic acid | 0.60 | 0.73 | 1.08 | 1.20 | 0.61 | 0.84 |
70 | Hexanal,4,4-dimethyl- | 2.01 | 2.28 | 2.40 | 2.07 | 2.12 | 2.18 |
71 | 2-monolinolenin | 4.73 | 4.99 | 4.47 | 3.33 | 5.76 | 4.66 |
72 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone | 3.24 | 3.71 | 3.97 | 3.49 | 3.86 | 3.65 |
73 | 1-(1-heptadecynyl)cyclopentanol | 5.36 | 8.70 | 6.86 | 5.30 | 7.51 | 6.75 |
74 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one | 3.53 | 5.56 | 5.17 | 4.41 | 4.38 | 4.61 |
75 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol | 3.62 | 6.59 | 5.19 | 4.86 | 4.63 | 4.98 |
76 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate | 3.33 | 3.45 | 4.27 | 3.37 | 4.33 | 3.75 |
77 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) | 4.89 | 6.90 | 7.11 | 5.73 | 6.81 | 6.29 |
78 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone | 2.80 | 3.91 | 3.96 | 3.41 | 4.28 | 3.67 |
79 | 5-cholestene-3-ol,24-methyl- | 4.92 | 8.80 | 7.63 | 6.54 | 6.63 | 6.90 |
80 | Stigmasta-5,22-dien-3-ol | 5.01 | 8.56 | 7.80 | 6.62 | 6.86 | 6.97 |
81 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl | 3.03 | 3.88 | 3.61 | 3.81 | 3.40 | 3.55 |
82 | gamma.-sitosterol | 4.79 | 9.34 | 8.02 | 6.73 | 7.04 | 7.19 |
Table 4 provides information regarding hydrophobicity classes, XLOGP3, WLOGP, MLOGP, SILICOS-IT, and the concensuslogP o/w (average hydrophobicity) values. The concensus logP o/w values of the compounds range from 0.26 to 7.19. 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol and gamma-sitosterol have the lowest and highest log average hydrophobicity values, respectively. Hydrophobicity of the identified phytocompounds greatly influences the solubility, permeability, selectivity, potency and promiscuity of the phytocompounds 15. The water solubility (LogS) of all the phytocompounds were also determined by using the SwissADME server tool. Water solubility values, solubility, and classes of solubility are all illustrated in Table 5.
TABLE 5: WATER SOLUBILITY CHARACTERISTICS OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Compd. no. | Compounds | ESOL | Ali | SILICOS-IT | |||||||||
Log S | Solubility | C | Log S | Solubility | C | Log S | Solubility | C | |||||
mg/mL | mol/L | mg/mL | mol/L | mg/mL | mol/LS | ||||||||
1 | 2-propenal,3–phenyl- | -2.17 | 8.97e-01 | 6.79e-03 | S | -1.88 | 1.74e+00 | 1.31e-02 | VS | -2.40 | 5.26e-01 | 3.98e-03 | S |
2 | 2,3-dihydro-benzofuran | -2.43 | 4.50e-01 | 3.75e-03 | S | -1.97 | 1.30e+00 | 1.08e-02 | VS | -2.64 | 2.76e-01 | 2.30e-03 | S |
3 | 3-hexene-2,5-dione | -0.32 | 5.35e+01 | 4.77e-01 | VS | -0.13 | 8.25e+01 | 7.36e-01 | VS | -0.58 | 2.94e+01 | 2.62e-01 | S |
4 | 2-methoxy-4-vinylphenol | -2.81 | 2.31e-01 | 1.54e-03 | S | -3.09 | 1.23e-01 | 8.21e-04 | S | -2.38 | 6.30e-01 | 4.20e-03 | S |
5 | 1-penten-3-one,1-phenyl- | -2.61 | 3.97e-01 | 2.48e-03 | S | -2.55 | 4.56e-01 | 2.85e-03 | S | -3.22 | 9.74e-02 | 6.08e-04 | S |
6 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-,trans- | -2.78 | 2.66e-01 | 1.66e-03 | S | -2.76 | 2.80e-01 | 1.75e-03 | S | -2.24 | 9.31e-01 | 5.81e-03 | S |
7 | 1H-Indene,1-ethylideneoctahydro-,trans- | -3.13 | 1.10e-01 | 7.34e-04 | S | -3.44 | 5.42e-02 | 3.61e-04 | S | -2.31 | 7.29e-01 | 4.85e-03 | S |
8 | 1,4-Diacetoxy-1,3-butadiene | -0.97 | 1.80e+01 | 1.06e-01 | VS | -1.33 | 7.95e+00 | 4.67e-02 | VS | -0.21 | 1.06e+02 | 6.21e-01 | S |
9 | 2,6-heptanedione,3-acetyl- | -0.47 | 5.76e+01 | 3.38e-01 | VS | -0.47 | 5.75e+01 | 3.38e-01 | VS | -1.74 | 3.10e+00 | 1.82e-02 | S |
10 | 1,3-decadiene-7,9-dione | -1.41 | 6.51e+00 | 3.92e-02 | VS | -1.80 | 2.61e+00 | 1.57e-02 | VS | -1.91 | 2.06e+00 | 1.24e-02 | S |
11 | 11-oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one | -1.56 | 4.88e+00 | 2.74e-02 | VS | -1.12 | 1.35e+01 | 7.58e-02 | VS | -2.06 | 1.54e+00 | 8.63e-03 | S |
12 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane | -3.49 | 5.37e-02 | 3.27e-04 | S | -3.88 | 2.17e-02 | 1.32e-04 | S | -2.68 | 3.41e-01 | 2.07e-03 | S |
13 | 2,6-cresotaldehyde | -2.28 | 7.07e-01 | 5.20e-03 | S | -2.35 | 6.11e-01 | 4.49e-03 | S | -2.13 | 1.02e+00 | 7.46e-03 | S |
14 | 2-tert-butyl-5-methyl-1,4-benzoquinone | -2.51 | 5.50e-01 | 3.09e-03 | S | -2.96 | 1.97e-01 | 1.11e-03 | S | -2.42 | 6.74e-01 | 3.78e-03 | S |
15 | 4-penten-2-one,3-cyclohexyl- | -2.86 | 2.30e-01 | 1.38e-03 | S | -3.51 | 5.13e-02 | 3.09e-04 | S | -2.14 | 1.21e+00 | 7.26e-03 | S |
16 | Aceticacid,(1,2-dimethyl-1-propenyl)ester | -1.66 | 2.79e+00 | 2.18e-02 | VS | -2.01 | 1.24e+00 | 9.71e-03 | S | -1.17 | 8.69e+00 | 6.78e-02 | S |
17 | 1-hexen-5-on,3-methyl-4-henyl- | -3.10 | 1.51e-01 | 7.92e-04 | S | -3.32 | 9.16e-02 | 4.81e-04 | S | -3.55 | 5.40e-02 | 2.84e-04 | S |
18 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl | -2.31 | 1.45e+00 | 4.91e-03 | S | -3.30 | 1.48e-01 | 5.02e-04 | S | -3.19 | 1.93e-01 | 6.53e-04 | S |
19 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- | -3.01 | 2.87e-01 | 9.82e-04 | S | -3.55 | 8.17e-02 | 2.79e-04 | S | -3.16 | 2.01e-01 | 6.89e-04 | S |
20 | 3-methyl-3-phenyl-2-oxiranecarbonitrile | -2.01 | 1.57e+00 | 9.85e-03 | S | -1.76 | 2.79e+00 | 1.75e-02 | VS | -2.91 | 1.97e-01 | 1.24e-03 | S |
21 | 2,5-monoformal-l-rhamnitoltriacetate | -1.73 | 5.94e+00 | 1.87e-02 | VS | -2.58 | 8.43e-01 | 2.65e-03 | S | -0.72 | 6.09e+01 | 1.91e-01 | S |
22 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- | -2.42 | 7.94e-01 | 3.77e-03 | S | -2.66 | 4.61e-01 | 2.19e-03 | S | -2.31 | 1.02e+00 | 4.86e-03 | S |
23 | 3-octen-2-one,8-phenyl- | -3.33 | 9.43e-02 | 4.66e-04 | S | -3.76 | 3.52e-02 | 1.74e-04 | S | -4.45 | 7.23e-03 | 3.57e-05 | MD |
24 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide | -2.42 | 1.17e+00 | 3.84e-03 | S | -2.99 | 3.10e-01 | 1.02e-03 | S | -3.31 | 1.50e-01 | 4.92e-04 | S |
25 | 3-acetylbicyclo[3.3.1]non-6-ene | -2.15 | 1.17e+00 | 7.13e-03 | S | -2.14 | 1.19e+00 | 7.23e-03 | S | -1.54 | 4.69e+00 | 2.86e-02 | S |
26 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol | -2.23 | 1.06e+00 | 5.91e-03 | S | -2.45 | 6.36e-01 | 3.53e-03 | S | -1.87 | 2.44e+00 | 1.35e-02 | S |
27 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester | -2.68 | 4.94e-01 | 2.11e-03 | S | -2.80 | 3.73e-01 | 1.59e-03 | S | -3.93 | 2.77e-02 | 1.18e-04 | S |
28 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one | -3.40 | 1.32e-01 | 4.00e-04 | S | -3.35 | 1.46e-01 | 4.43e-04 | S | -3.31 | 1.64e-01 | 4.95e-04 | S |
29 | 2,4-oxazolidinedione,5-ethyl-3,5-dimethyl- | -1.27 | 8.41e+00 | 5.35e-02 | VS | -1.39 | 6.38e+00 | 4.06e-02 | VS | -1.11 | 1.23e+01 | 7.83e-02 | S |
30 | 2-hexanol,3,3,5-trimethyl-2-(3-methylphenyl)- | -4.13 | 1.76e-02 | 7.49e-05 | MS | -4.65 | 5.30e-03 | 2.26e-05 | MS | -4.70 | 4.64e-03 | 1.98e-05 | MS |
31 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol | -1.42 | 6.97e+00 | 3.83e-02 | VS | -1.14 | 1.33e+01 | 7.28e-02 | VS | -1.83 | 2.72e+00 | 1.49e-02 | S |
32 | 3-pentanone,2-methyl-4-phenyl- | -3.07 | 1.51e-01 | 8.57e-04 | S | -3.19 | 1.14e-01 | 6.47e-04 | S | -3.60 | 4.42e-02 | 2.51e-04 | S |
33 | Neophytadiene | -6.77 | 4.74e-05 | 1.70e-07 | PS | -9.53 | 8.15e-08 | 2.93e-10 | PS | -6.11 | 2.18e-04 | 7.82e-07 | PS |
34 | Hotrienyl acetate | -2.77 | 3.34e-01 | 1.72e-03 | S | -3.59 | 4.99e-02 | 2.57e-04 | S | -2.17 | 1.31e+00 | 6.76e-03 | S |
35 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R | -2.77 | 3.34e-01 | 1.72e-03 | S | -3.59 | 4.99e-02 | 2.57e-04 | S | -2.17 | 1.31e+00 | 6.76e-03 | S |
36 | 5-methyl-2(2-oxo-4-heptyl)furan | -2.60 | 4.90e-01 | 2.52e-03 | S | -2.85 | 2.73e-01 | 1.40e-03 | S | -3.99 | 2.00e-02 | 1.03e-04 | S |
37 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne | -4.20 | 1.18e-02 | 6.29e-05 | MS | -4.81 | 2.90e-03 | 1.54e-05 | MS | -2.56 | 5.21e-01 | 2.77e-03 | S |
38 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- | -4.98 | 4.52e-03 | 1.04e-05 | MS | -7.51 | 1.36e-05 | 3.11e-08 | PS | -5.17 | 2.92e-03 | 6.70e-06 | MS |
39 | 2,5-heptanedione,3,3,6-trimethyl- | -1.58 | 4.45e+00 | 2.61e-02 | VS | -1.84 | 2.49e+00 | 1.46e-02 | VS | -2.21 | 1.05e+00 | 6.17e-03 | S |
40 | Hexadecanoic, methylester | -5.18 | 1.80e-03 | 6.67e-06 | MS | -7.76 | 4.68e-06 | 1.73e-08 | PS | -6.01 | 2.64e-04 | 9.75e-07 | PS |
41 | Propanoic acid, 2-methyl-3-Phenyl-2-propenyl ester | -3.15 | 1.44e-01 | 7.06e-04 | S | -3.53 | 6.06e-02 | 2.97e-04 | S | -3.41 | 7.95e-02 | 3.89e-04 | S |
42 | 1,3-pentanedione,2,4-dimethyl-1-phenyl- | -3.12 | 1.54e-01 | 7.53e-04 | S | -3.54 | 5.93e-02 | 2.90e-04 | S | -3.56 | 5.64e-02 | 2.76e-04 | S |
43 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-1a,3,4,5,5a,5b,6,7,9,10,10a,10b,10c-tetradeca -hydro-7ah -cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate | -2.44 | 1.63e+00 | 3.64e-03 | S | -2.41 | 1.73e+00 | 3.86e-03 | S | -2.10 | 3.60e+00 | 8.02e-03 | S |
44 | Hexadecanoic acid | -5.02 | 2.43e-03 | 9.49e-06 | MS | -7.77 | 4.31e-06 | 1.68e-08 | PS | -5.31 | 1.25e-03 | 4.88e-06 | MS |
45 | Menthylacetate | -3.39 | 8.05e-02 | 4.06e-04 | S | -4.25 | 1.10e-02 | 5.57e-05 | MS | -2.15 | 1.41e+00 | 7.13e-03 | S |
46 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer | -2.56 | 4.98e-01 | 2.76e-03 | S | -2.98 | 1.88e-01 | 1.04e-03 | S | -3.25 | 1.01e-01 | 5.60e-04 | S |
47 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester | -4.97 | 3.14e-03 | 1.07e-05 | MS | -7.18 | 1.94e-05 | 6.60e-08 | PS | -5.37 | 1.25e-03 | 4.25e-06 | MS |
48 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) | -4.69 | 5.94e-03 | 2.03e-05 | MS | -6.63 | 6.85e-05 | 2.34e-07 | PS | -4.65 | 6.49e-03 | 2.22e-05 | MS |
49 | 2-Undecen-4-ol | -2.87 | 2.29e-01 | 1.34e-03 | S | -3.99 | 1.73e-02 | 1.02e-04 | S | -2.64 | 3.89e-01 | 2.29e-03 | S |
50 | 8-tetradecyn-1-ol | -3.85 | 3.01e-02 | 1.43e-04 | S | -5.40 | 8.31e-04 | 3.95e-06 | MS | -4.23 | 1.23e-02 | 5.83e-05 | MS |
51 | Cyclohexanol,1-methyl-,acetate | -2.01 | 1.54e+00 | 9.87e-03 | S | -2.29 | 7.96e-01 | 5.09e-03 | S | -1.99 | 1.62e+00 | 1.04e-02 | S |
52 | Octadecanoic acid | -5.73 | 5.26e-04 | 1.85e-06 | MS | -8.87 | 3.80e-07 | 1.33e-09 | PS | -6.11 | 2.19e-04 | 7.71e-07 | PS |
53 | 1, 5-dodecadiene | -3.66 | 3.61e-02 | 2.17e-04 | S | -5.02 | 1.59e-03 | 9.55e-06 | MS | -3.63 | 3.91e-02 | 2.35e-04 | S |
54 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) | -4.62 | 8.03e-03 | 2.42e-05 | MS | -5.15 | 2.34e-03 | 7.04e-06 | MS | -3.68 | 6.91e-02 | 2.08e-04 | S |
55 | Phytol,acetate | -6.47 | 1.15e-04 | 3.40e-07 | PS | -9.19 | 2.17e-07 | 6.40e-10 | PS | -6.14 | 2.43e-04 | 7.18e-07 | PS |
56 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene | -1.94 | 3.38e+00 | 1.16e-02 | VS | -2.93 | 3.44e-01 | 1.18e-03 | S | -0.33 | 1.36e+02 | 4.67e-01 | S |
57 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate | -3.49 | 8.74e-02 | 3.26e-04 | S | -5.05 | 2.41e-03 | 8.98e-06 | MS | -4.16 | 1.87e-02 | 6.98e-05 | MS |
58 | Methyl (9Z)-12-hydroxy-9-octadecenoate | -4.45 | 1.11e-02 | 3.54e-05 | MS | -6.67 | 6.66e-05 | 2.13e-07 | PS | -5.15 | 2.20e-03 | 7.05e-06 | MS |
59 | 1-(1H-imidazol-2-yl) ethanone | -0.97 | 1.18e+01 | 1.07e-01 | VS | -0.59 | 2.80e+01 | 2.54e-01 | VS | -1.51 | 3.42e+00 | 3.10e-02 | S |
60 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester | -1.90 | 3.32e+00 | 1.26e-02 | VS | -2.15 | 1.85e+00 | 7.04e-03 | S | -3.65 | 5.85e-02 | 2.22e-04 | S |
61 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- | -1.59 | 4.36e+00 | 2.56e-02 | VS | -2.17 | 1.16e+00 | 6.82e-03 | S | -0.88 | 2.22e+01 | 1.31e-01 | S |
62 | 3,5-heptanedione,2,2,6,6-tetramethyl | -2.49 | 5.98e-01 | 3.24e-03 | S | -3.18 | 1.21e-01 | 6.55e-04 | S | -2.25 | 1.04e+00 | 5.66e-03 | S |
63 | Nonanoic acid | -2.51 | 4.85e-01 | 3.06e-03 | S | -3.88 | 2.07e-02 | 1.31e-04 | S | -2.46 | 5.46e-01 | 3.45e-03 | S |
64 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol | -0.56 | 5.68e+01 | 2.78e-01 | VS | -0.32 | 9.73e+01 | 4.77e-01 | VS | -0.78 | 3.38e+01 | 1.66e-01 | S |
65 | 4, 6-nonanedione,5-(3-butanon-1-yl)-2,8-dimethyl- | -2.32 | 1.21e+00 | 4.76e-03 | S | -3.10 | 2.04e-01 | 8.01e-04 | S | -3.43 | 9.41e-02 | 3.70e-04 | S |
66 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methyl ethyl ester | -0.93 | 2.69e+01 | 1.17e-01 | VS | -1.08 | 1.90e+01 | 8.27e-02 | VS | -0.71 | 4.51e+01 | 1.97e-01 | |
67 | 3,5-dimethyl-cyclohexanol | -2.04 | 1.17e+00 | 9.12e-03 | S | -2.29 | 6.57e-01 | 5.13e-03 | S | -1.01 | 1.24e+01 | 9.66e-02 | S |
68 | 5,7-dodecadiene-4,9-dione,6,7-dihydroxy-2,11-dimethyl- | -2.86 | 3.53e-01 | 1.39e-03 | S | -4.25 | 1.42e-02 | 5.60e-05 | MS | -1.27 | 1.37e+01 | 5.40e-02 | S |
69 | 1,2-benzenedicarboxylic acid | -1.57 | 4.49e+00 | 2.70e-02 | VS | -1.88 | 2.21e+00 | 1.33e-02 | VS | -1.14 | 1.21e+01 | 7.29e-02 | S |
70 | Hexanal,4,4-dimethyl- | -1.81 | 2.00e+00 | 1.56e-02 | VS | -2.28 | 6.80e-01 | 5.30e-03 | S | -2.21 | 7.83e-01 | 6.11e-03 | S |
71 | 2-monolinolenin | -4.05 | 3.16e-02 | 8.97e-05 | MS | -6.13 | 2.61e-04 | 7.39e-07 | PS | -3.94 | 4.04e-02 | 1.15e-04 | S |
72 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone | -4.26 | 1.91e-02 | 5.50e-05 | MS | -4.45 | 1.24e-02 | 3.57e-05 | MS | -3.57 | 9.41e-02 | 2.72e-04 | S |
73 | 1-(1-heptadecynyl)cyclopentanol | -6.45 | 1.14e-04 | 3.54e-07 | PS | -9.00 | 3.18e-07 | 9.91e-10 | PS | -6.80 | 5.12e-05 | 1.60e-07 | PS |
74 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one | CCCC | 1.29e-03 | 3.58e-06 | MS | -6.23 | 2.12e-04 | 5.87e-07 | PS | -4.55 | 1.02e-02 | 2.83e-05 | MS |
75 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol | -5.73 | 5.45e-04 | 1.88e-06 | MS | -6.81 | 4.45e-05 | 1.53e-07 | PS | -4.22 | 1.74e-02 | 6.00e-05 | MS |
76 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate | -4.19 | 2.40e-02 | 6.44e-05 | MS | -4.40 | 1.48e-02 | 3.98e-05 | MS | -4.74 | 6.83e-03 | 1.83e-05 | MS |
77 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) | -6.61 | 1.12e-04 | 2.45e-07 | PS | -7.53 | 1.35e-05 | 2.97e-08 | PS | -5.40 | 1.82e-03 | 4.00e-06 | MS |
78 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone | -3.40 | 8.35e-02 | 4.01e-04 | S | -3.97 | 2.25e-02 | 1.08e-04 | S | -4.10 | 1.66e-02 | 7.98e-05 | MS |
79 | 5-cholestene-3-ol,24-methyl- | -7.54 | 1.16e-05 | 2.90e-08 | PS | -9.11 | 3.13e-07 | 7.80e-10 | PS | -5.79 | 6.42e-04 | 1.60e-06 | MS |
80 | Stigmasta-5,22-dien-3-ol | -7.46 | 1.43e-05 | 3.46e-08 | PS | -8.86 | 5.71e-07 | 1.38e-09 | PS | -5.47 | 1.40e-03 | 3.39e-06 | MS |
81 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl | -3.66 | 4.83e-02 | 2.17e-04 | S | -4.00 | 2.21e-02 | 9.95e-05 | MS | -3.18 | 1.46e-01 | 6.55e-04 | S |
82 | gamma.-sitosterol | -7.90 | 5.23e-06 | 1.26e-08 | PS | -9.67 | 8.90e-08 | 2.15e-10 | PS | -6.19 | 2.69e-04 | 6.49e-07 | PS |
*C- Solubility class, PS- Poorly soluble, MS- Moderately soluble, S- soluble and VS- Very soluble.
Drug-likeness of all the phytocompounds was also evaluated by SwissADME analysis based on the five rules, viz.Lipinski, Ghose, Veber, Egan and Muegge rules. Drug-likeness qualitatively evaluates the probability for a molecule to become an oral drug with respect to bioavailability. Bioavailability scores of all the phytocompounds were similarly determined by SwissADME analysis. Bioavailability score is the parameter that determines the extent and rate at which compounds enter and eventually reaches the target sites upon administration 16, 17, 18. The drug-likeness and bioavailability scores are given together in the Table 6.
TABLE 6: DRUGLIKENESS AND BIOAVAILABILITY SCORES VALUES OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Compd. no. | Compounds | Lipinski | Ghose | Veber | Egan | Muegge | BS |
1 | 3–phenyl-2-propenal | yes | No; 2 violations: MW<160, #atoms<20 | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
2 | 2,3-dihydro-benzofuran | yes | No; 3 violations: MW<160, MR<40, #atoms<20 | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
3 | 3-hexene-2,5-dione | yes | No; 3 violations: MW<160, MR<40, #atoms<20 | yes | yes | No; 1 violation: MW<200 | 0.55 |
4 | 2-methoxy-4-vinylphenol | yes | No; 1 violation: MW<160 | yes | yes | No; 1 violation: MW<200 | 0.55 |
5 | 1-penten-3-one,1-phenyl- | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
6 | Biphenylene,1,2,3,6,7,8,8a,8b-octahydro-,trans- | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
7 | 1H-Indene,1-ethylideneoctahydro-, trans- | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: MW<160 | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
8 | 1,4-Diacetoxy-1,3-butadiene | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
9 | 3-acetyl-2,6-heptanedione | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
10 | 1,3-decadiene-7,9-dione | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
11 | 11-oxatetracyclo[5.3.2.0(2,7).0(2,8)]dodecan-9-one | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
12 | 2-(3,3-dimethyl-1-butynyl)-1,1,3-trimethylcyclopropane | Yes; 1 violation: MLOGP>4.15 | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
13 | 2,6-cresotaldehyde | yes | No; 3 violations: MW<160, MR<40, #atoms<20 | yes | yes | No; 1 violation: MW<200 | 0.55 |
14 | 2-tert-butyl-5-methyl-1,4-benzoquinone | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
15 | 4-penten-2-one,3-cyclohexyl- | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
16 | Aceticacid,(1,2-dimethyl-1-propenyl)ester | yes | No; 2 violations: MW<160, MR<40 | yes | yes | No; 1 violation: MW<200 | 0.55 |
17 | 1-hexen-5-on,3-methyl-4-henyl- | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
18 | Acetate,3-(acetyloxy)-2-nitro-2-benzylpropyl | yes | yes | yes | yes | yes | 0.55 |
19 | 6-[1-hydroxymethyl)Vinyl]-4,8A-dimethyl- | yes | yes | yes | yes | yes | 0.55 |
20 | 3-methyl-3-phenyl-2-oxiranecarbonitrile | yes | No; 1 violation: MW<160 | yes | yes | No; 1 violation: MW<200 | 0.55 |
21 | 2,5-monoformal-l-rhamnitoltriacetate | yes | yes | yes | yes | yes | 0.55 |
22 | 3-buten-2-one,4-(2-hydroxy-2,6,6-trimethylcyclohexyl)- | yes | yes | yes | yes | yes | 0.55 |
23 | 8-phenyl-3-octen-2-one | yes | yes | yes | yes | No; 1 violation: Heteroatoms<2 | 0.55 |
24 | Adamantane-1-carboxylicacid,(4-acetylaminofurazan-3-yl)amide | yes | yes | yes | yes | yes | 0.55 |
25 | 3-acetylbicyclo[3.3.1]non-6-ene | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
26 | 4-((1E)-3-hydroxy-1-propenyl)-2-methoxyphenol | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
27 | 3-phenylpropionicacid,2-tetrahydrofurylmethylester | yes | yes | yes | yes | yes | 0.55 |
28 | Pregna-5,16-dien-3.beta,9.alpha.-diol-20-one | yes | yes | yes | yes | yes | 0.55 |
29 | 5-ethyl-3,5-dimethyl-2,4-oxazolidinedione | yes | No; 1 violation: MW<160 | yes | yes | No; 1 violation: MW<200 | 0.55 |
30 | 3,3,5-trimethyl-2-(3-methylphenyl)-2-hexanol | yes | yes | yes | yes | No; 1 violation: Heteroatoms<2 | 0.55 |
31 | 2,6,8-trimethylbicyclo[4.2.0]oct-2-ene-11,8-diol | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
32 | 2-methyl-4-phenyl-3-pentanone | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
33 | Neophytadiene | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
34 | Hotrienyl acetate | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
35 | 2-hexadecen-1-ol, 3, 7, 11, 15-tetramethyl-[R-[R | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
36 | 5-methyl-2(2-oxo-4-heptyl)furan | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
37 | 2, 2, 9, 9-tetramethyl-5-decene-3, 7-diyne | Yes; 1 violation: MLOGP>4.15 | yes | yes | yes | No; 3 violations: MW<200, XLOGP3>5, Heteroatoms<2 | 0.55 |
38 | 9,12,15-Octadecatrienoic acid, 2,3-bis(acetyloxy)propyl ester, (Z,Z,Z)- | yes | No; 2 violations: WLOGP>5.6, #atoms>70 | No; 1 violation: Rotors>10 | yes | No; 2 violations: XLOGP3>5, Rotors>15 | 0.55 |
39 | 3,3,6-trimethyl-2,5-heptanedione | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
40 | Hexadecanoic, methylester | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | yes | No; 1 violation: XLOGP3>5 | 0.55 |
41 | Propanoic acid, 2-methyl-3-Phenyl-2-propenyl ester | yes | yes | yes | yes | yes | 0.55 |
42 | 2,4-dimethyl-1-phenyl-1,3-pentanedione | yes | yes | yes | yes | yes | 0.55 |
43 | 8-acetyl-7A-[(acetyloxy)methyl]-5B-hydroxy-5A-methyl-3-oxo-1a,3,4,5,5a,5b,6,7,9,10,10a,10b,10c-tetradeca -hydro-7ah -cyclopental[1,2]phenanthro[9,10-b]oxiren-6-yl acetate | yes | yes | yes | yes | yes | 0.55 |
44 | Hexadecanoic acid | Yes; 1 violation: MLOGP>4.15 | yes | No; 1 violation: Rotors>10 | yes | No; 1 violation: XLOGP3>5 | 0.85 |
45 | Menthylacetate | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
46 | 2-pentanone,5-(2-methylenecyclohexyl)-,stereoisomer | yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
47 | 9, 12-octadecadienoic acid (Z, Z)-methyl ester | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 1 violation: XLOGP3>5 | 0.55 |
48 | 9, 12, 15-octadecatrienoic acid, methyl ester (Z, Z, Z) | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | yes | No; 1 violation: XLOGP3>5 | 0.55 |
49 | 2-Undecen-4-ol
|
yes | yes | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
50 | 8-tetradecyn-1-ol | yes | yes | yes | yes | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
51 | Cyclohexanol,1-methyl-,acetate | yes | No; 1 violation: MW<160 | yes | yes | No; 1 violation: MW<200 | 0.55 |
52 | Octadecanoic acid | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Rotors>15 | 0.85 |
53 | 1, 5-dodecadiene | Yes; 1 violation: MLOGP>4.15 | yes | yes | yes | No; 3 violations: MW<200, XLOGP3>5, Heteroatoms<2 | 0.55 |
54 | Estran-3-one, 17-(acetyloxy)-2-methyl, (2alpha, 5alpha, 17beta) | yes | yes | Yes | yes | yes | 0.55 |
55 | Phytol,acetate | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 1 violation: XLOGP3>5 | 0.55 |
56 | 1, 1-diacetoxy-9, 9-diformylnona-2,4,6,8-tetraene | yes | yes | yes | yes | yes | 0.55 |
57 | Z-(13, 14-epoxy) tetradec-11-en-1-ol acetate | yes | yes | No; 1 violation: Rotors>10 | yes | yes | 0.55 |
58 | Methyl (9Z)-12-hydroxy-9-octadecenoate | yes | yes | No; 1 violation: Rotors>10 | yes | No; 2 violations: XLOGP3>5, Rotors>15 | 0.55 |
59 | 1-(1H-imidazol-2-yl)ethanone | yes | No; 3 violations: MW<160, MR<40, #atoms<20 | yes | yes | No; 1 violation: MW<200 | 0.55 |
60 | Aceticacid,4-[2-(acetylamino)-3-oxobutyl]phenylester | yes | yes | yes | yes | yes | 0.55 |
61 | 2-hexenoicacid,3,4,4-trimethyl-5-oxo-,(E)- | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.85 |
62 | 3,5-heptanedione,2,2,6,6-tetramethyl | yes | yes | yes | yes | No; 1 violation: MW<200 | 0.55 |
63 | Nonanoic acid | yes | No; 1 violation: MW<160 | yes | yes | No; 1 violation: MW<200 | 0.85 |
64 | 3-O-acetyl-1,4-anhydro-2,5-di-O-methyl-D-xylitol | yes | yes | yes | yes | yes | 0.55 |
65 | 5-(3-butanon-1-yl)-2,8-dimethyl-4, 6-nonanedione | yes | yes | yes | yes | yes | 0.55 |
66 | Acetic acid, 2-(2-acetyl-3-oxoisoxazolidin-5-yl)-1-methyl ethyl ester | yes | yes | yes | yes | yes | 0.55 |
67 | 3,5-dimethyl-cyclohexanol | yes | No; 2 violations: MW<160, MR<40 | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
68 | 6,7-dihydroxy-2,11-dimethyl-5,7-dodecadiene-4,9-dione | yes | yes | yes | yes | yes | 0.85 |
69 | 1,2-benzenedicarboxylic acid | yes | No; 1 violation: #atoms<20 | yes | yes | No; 1 violation: MW<200 | 0.85 |
70 | 4,4-dimethyl-hexanal | yes | No; 1 violation: MW<160 | yes | yes | No; 2 violations: MW<200, Heteroatoms<2 | 0.55 |
71 | 2-monolinolenin | yes | yes | No; 1 violation: Rotors>10 | yes | No; 1 violation: Rotors>15 | 0.55 |
72 | 1-(2-hydroxy-7,9a,11b-trimethylhexadecahydrocyclopenta[1,2]phenanthro[8a,9-b]oxiren-9-yl)ethanone | yes | yes | yes | yes | yes | 0.55 |
73 | 1-(1-heptadecynyl)cyclopentanol | Yes; 1 violation: MLOGP>4.15 | No; 1 violation: WLOGP>5.6 | No; 1 violation: Rotors>10 | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
74 | 3.beta.-acetoxy-17.alpha.-methyl-d-homoandrostane-17a-one | Yes; 1 violation: MLOGP>4.15 | yes | yes | yes | No; 1 violation: XLOGP3>5 | 0.55 |
75 | 2,4,7,14-tetramethyl-4-vinyl-tricyclo[5.4.3.0(1,8)]tetradecan-6-ol | Yes; 1 violation: MLOGP>4.15 | yes | yes | yes | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
76 | 4,4-dimethyl-3,7-dioxoandrost-5-en-17-yl acetate | yes | yes | yes | yes | yes | 0.55 |
77 | Ergost-7,22-dien-9,11-epoxy-3-ol,acetate(ester) | Yes; 1 violation: MLOGP>4.15 | No; 3 violations: WLOGP>5.6, MR>130, #atoms>70 | yes | No; 1 violation: WLOGP>5.88 | No; 1 violation: XLOGP3>5 | 0.55 |
78 | 4-(2,2,6-trimethylbicyclo[4.1.0]Hept-1-yl)-2-butanone | yes | yes | yes | yes | No; 1 violation: Heteroatoms<2 | 0.55 |
79 | 24-methyl-5-cholestene-3-ol | Yes; 1 violation: MLOGP>4.15 | No; 2 violations: WLOGP>5.6, #atoms>70 | yes | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
80 | Stigmasta-5,22-dien-3-ol | Yes; 1 violation: MLOGP>4.15 | No; 3 violations: WLOGP>5.6, MR>130, #atoms>70 | yes | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
81 | 1H-3A,7-methanozulen-6-ol,octahydro3,6,8,8-tetramethyl | yes | yes | yes | yes | No; 1 violation: Heteroatoms<2 | 0.55 |
82 | gamma.-sitosterol | Yes; 1 violation: MLOGP>4.15 | No; 3 violations: WLOGP>5.6, MR>130, #atoms>70 | yes | No; 1 violation: WLOGP>5.88 | No; 2 violations: XLOGP3>5, Heteroatoms<2 | 0.55 |
* BS: Bioavailability score.
All the phytocompounds follow RO5 or Lipinski Rule of 5. However, only twenty-five phytocompounds, i.e., compounds 18, 19, 21, 22, 24, 25, 26, 27, 28, 41, 42, 43, 50, 51, 53, 54, 56, 57, 60, 64, 65, 66, 68, 72, and 76, follow all the five drug-likeness rules, namely, Lipinski, Ghose, Veber, Egen, and Muegge. Regarding the bioavailibilty, all the phytocompounds have bioavailability score of 0.55 and above indicating good pharmacokinetic properties. Using the SMILE string, the ADMET properties each of the 82 phytocompounds was predicted using pkCSM online tool (http://biosig.unimelb.edu.au/pkcsm/prediction). The absorptional and distributional characteristics of the phytocompounds obtained are given in the Table 7.
TABLE 7: THE ABSORPTION AND DISTRIBUTION CHARACTERISTICS OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Absorption | Distribution | |||||||||
Compd. no. | Caco2 permeability
(log Papp in 10-6 cm/s) |
HIA (% Absorbed) | Log Kp(cm/s) | Pgp substrate | Pgp ι i | Pgpιιi | VDsslog L/kg | Fu | log BB | log PS |
1 | 1.634 | 95.015 | -2.355 | No | No | No | 0.266 | 0.3 | 0.436 | -1.582 |
2 | 1.39 | 96.926 | -1.995 | No | No | No | 0.236 | 0.381 | 0.452 | -1.901 |
3 | 1.413 | 100 | -2.71 | No | No | No | -0.23 | 0.698 | -0.193 | -2.464 |
4 | 1.338 | 94.645 | -2.735 | No | No | No | 0.008 | 0.704 | 0.216 | -2.783 |
5 | 1.426 | 97.254 | -1.695 | No | No | No | 0.295 | 0.237 | 0.479 | -1.661 |
6 | 1.388 | 95.858 | -1.904 | No | No | No | 0.695 | 0.413 | 0.78 | -2.459 |
7 | 1.397 | 95.384 | -1.587 | No | No | No | 0.564 | 0.21 | 0.804 | -1.325 |
8 | 1.235 | 100 | -2.804 | No | No | No | -0.366 | 0.653 | -0.273 | -2.906 |
9 | 1.219 | 97.722 | -2.643 | No | No | No | -0.227 | 0.627 | -0.212 | -2.877 |
10 | 1.112 | 97.424 | -2.005 | No | No | No | -0.039 | 0.489 | 0.227 | -2.236 |
11 | 1.324 | 98.614 | -2.792 | No | No | No | 0.35 | 0.436 | 0.046 | -2.204 |
12 | 1.426 | 96.202 | -1.29 | No | No | No | 0.449 | 0.255 | 0.784 | -1.437 |
13 | 1.716 | 93.307 | -2.192 | No | No | No | 0.131 | 0.502 | -0.192 | -2.076 |
14 | 1.248 | 98.909 | -2.403 | No | No | No | -0.026 | 0.463 | 0.339 | -2.109 |
15 | 1.21 | 96.485 | -1.632 | No | No | No | 0.207 | 0.327 | 0.664 | -1.836 |
16 | 1.625 | 96.389 | -2.715 | No | No | No | -0.151 | 0.649 | 0.132 | -2.615 |
17 | 1.625 | 92.682 | -1.592 | No | No | No | 0.626 | 0.195 | 0.568 | -1.972 |
18 | 0.571 | 82.963 | -2.771 | No | Yes | No | -0.378 | 0.211 | -0.832 | -2.868 |
19 | 1.07 | 95.73 | -3.33 | No | Yes | No | 0.019 | 0.29 | -0.156 | -2.29 |
20 | 1.491 | 96.936 | -2.877 | No | No | No | 0.145 | 0.372 | 0.279 | -2.134 |
21 | 0.306 | 81.748 | -2.514 | No | No | No | -0.21 | 0.595 | -1.305 | -3.068 |
22 | 1.219 | 94.291 | -2.657 | No | No | No | 0.056 | 0.481 | 0.112 | -2.753 |
23 | 1.387 | 96.225 | -1.762 | No | No | No | 0.462 | 0.112 | 0.659 | -1.495 |
24 | 0.734 | 90.658 | -3.317 | Yes | No | No | 0.039 | 0.199 | 0.121 | -2.288 |
25 | 1.239 | 97.392 | -2.005 | No | No | No | 0.307 | 0.413 | 0.646 | -2.149 |
26 | 1.227 | 91.734 | -2.848 | No | No | No | -0.125 | 0.292 | -0.182 | -2.569 |
27 | 1.708 | 97.729 | -2.563 | No | No | No | 0.197 | 0.252 | 0.646 | -2.341 |
28 | 1.338 | 95.227 | -3.784 | No | No | No | 0.367 | 0.296 | 0.054 | -2.857 |
29 | 1.208 | 98.477 | -3.603 | No | No | No | -0.106 | 0.704 | -0.216 | -3.014 |
30 | 1.658 | 93.658 | -1.626 | No | No | No | 0.845 | 0.07 | 0.518 | -1.913 |
31 | 1.576 | 94.58 | -3.635 | No | No | No | 0.052 | 0.618 | 0.354 | -3.168 |
32 | 1.401 | 97.754 | -1.772 | No | No | No | 0.336 | 0.195 | 0.503 | -1.57 |
33 | 1.425 | 92.85 | -2.518 | No | No | Yes | 0.692 | 0 | 0.983 | -1.299 |
34 | 1.82 | 96.202 | -1.915 | No | No | No | 0.062 | 0.432 | 0.552 | -2.414 |
35 | 1.515 | 90.71 | -2.576 | No | No | Yes | 0.468 | 0 | 0.806 | -1.563 |
36 | 1.584 | 94.781 | -1.865 | No | No | No | 0.214 | 0.373 | 0.45 | -2.585 |
37 | 1.461 | 95.863 | -1.706 | No | No | No | 0.268 | 0.11 | 0.806 | -0.6 |
38 | 0.52 | 94.463 | -2.718 | No | Yes | Yes | -0.315 | 0.059 | -0.97 | -3.116 |
39 | 1.429 | 96.618 | -2.147 | No | No | No | -0.091 | 0.511 | 0.361 | -2.236 |
40 | 1.6 | 92.335 | -2.595 | No | No | No | 0.334 | 0.074 | 0.749 | -1.678 |
41 | 1.699 | 96.779 | -1.763 | No | No | No | 0.238 | 0.151 | 0.325 | -1.561 |
42 | 1.196 | 97.399 | -2.251 | No | No | No | 0.091 | 0.215 | 0.287 | -1.744 |
43 | 0.883 | 94.418 | -3.064 | Yes | Yes | No | -0.015 | 0.27 | -0.777 | -3.004 |
44 | 1.558 | 92.004 | -2.717 | No | No | No | -0.543 | 0.101 | -0.111 | -1.816 |
45 | 1.698 | 96.497 | -2.208 | No | No | No | 0.125 | 0.439 | 0.539 | -2.39 |
46 | 1.238 | 95.585 | -1.558 | No | No | No | 0.25 | 0.265 | 0.673 | -1.768 |
47 | 1.612 | 92.66 | -2.719 | No | No | Yes | 0.272 | 0.028 | 0.767 | -1.463 |
48 | 1.619 | 93.166 | -2.675 | No | No | Yes | 0.246 | 0.029 | 0.757 | -1.41 |
49 | 1.485 | 92.414 | -1.371 | No | No | No | 0.287 | 0.356 | 0.666 | -2.064 |
50 | 1.486 | 92.303 | -1.765 | No | No | No | 0.357 | 0.198 | 0.737 | -1.687 |
51 | 1.602 | 96.442 | -2.69 | No | No | No | 0.078 | 0.614 | 0.216 | -2.997 |
52 | 1.556 | 91.317 | -2.726 | No | No | No | -0.528 | 0.051 | -0.195 | -1.707 |
53 | 1.385 | 93.402 | -1.214 | No | No | No | 0.542 | 0.214 | 0.864 | -1.582 |
54 | 1.413 | 97.238 | -3.175 | No | Yes | No | 0.298 | 0.061 | 0.234 | -2.203 |
55 | 1.174 | 92.822 | -2.753 | No | No | Yes | 0.364 | 0 | 0.766 | -1.603 |
56 | 0.862 | 98.346 | -2.616 | No | Yes | No | -0.479 | 0.388 | -0.753 | -3.095 |
57 | 1.661 | 95.058 | -4.38 | No | Yes | No | 0.198 | 0.179 | -0.034 | -2.242 |
58 | 1.534 | 90.69 | -2.769 | No | No | Yes | 0.1 | 0.114 | 0.101 | -1.892 |
59 | 1.602 | 100 | -2.735 | Yes | No | No | 0.012 | 0.683 | 0.606 | -2.107 |
60 | 0.585 | 79.827 | -3.307 | No | No | No | -0.268 | 0.359 | -0.339 | -2.745 |
61 | 1.22 | 97.609 | -2.734 | No | No | No | -0.899 | 0.576 | -0.115 | -2.885 |
62 | 1.092 | 97.63 | -2.061 | No | No | No | -0.142 | 0.398 | 0.246 | -1.814 |
63 | 1.565 | 94.409 | -2.687 | No | No | No | -0.734 | 0.419 | 0.184 | -2.198 |
64 | 1.189 | 100 | -3.219 | No | No | No | -0.261 | 0.731 | -0.29 | -3.025 |
65 | 1.558 | 98.547 | -2.457 | No | Yes | No | -0.146 | 0.248 | -0.393 | -2.485 |
66 | 0.921 | 100 | -2.703 | No | No | No | -0.221 | 0.665 | -0.602 | -3.001 |
67 | 1.49 | 94.385 | -2.582 | Yes | No | No | 0.134 | 0.617 | 0.154 | -2.652 |
68 | 1.49 | 94.385 | -2.582 | Yes | No | No | 0.134 | 0.617 | 0.154 | -2.888 |
69 | 0.641 | 75.609 | -2.735 | No | No | No | -1.775 | 0.497 | -0.038 | -2.891 |
70 | 1.503 | 95.799 | -1.749 | No | No | No | 0.098 | 0.524 | 0.629 | -2.231 |
71 | 0.444 | 91.109 | -2.811 | No | Yes | Yes | -0.381 | 0.151 | -0.267 | -3.174 |
72 | 1.227 | 95.156 | -3.553 | No | Yes | No | 0.259 | 0.123 | -0.078 | -1.799 |
73 | 1.478 | 89.887 | -2.729 | No | No | Yes | 0.514 | 0 | 0.805 | -1.769 |
74 | 1.18 | 98.151 | -3.219 | No | Yes | Yes | 0.31 | 0.002 | -0.124 | -2.327 |
75 | 1.521 | 94.297 | -2.569 | No | No | No | 0.541 | 0.011 | 0.65 | -1.957 |
76 | 1.468 | 99.173 | -3.454 | No | Yes | Yes | 0.187 | 0.09 | -0.273 | -1.592 |
77 | 1.193 | 97.003 | -3.464 | No | Yes | Yes | 0.43 | 0 | 0.207 | -2.333 |
78 | 1.352 | 95.368 | -1.823 | No | No | No | 0.378 | 0.207 | 0.676 | -1.917 |
79 | 1.223 | 94.543 | -2.86 | No | Yes | Yes | 0.427 | 0 | 0.774 | -1.758 |
80 | 1.213 | 94.97 | -2.783 | No | Yes | Yes | 0.178 | 0 | 0.771 | -1.652 |
81 | 1.496 | 93.844 | -2.163 | No | No | No | 0.572 | 0.249 | 0.627 | -2.216 |
82 | 1.201 | 94.464 | -2.783 | No | Yes | Yes | 0.193 | 0 | 0.781 | -1.705 |
*HIA: Human intestinal absorption, Pgp: P-Glycoprotein, Fu: Fraction unbound.
Caco-2 cell line, which was composed of human epithelial colorectal adenocarcinoma cells, is widely used to predict the absorption of orally administered drugs. The Caco2 permeability values of the phytocompounds from the aqueous methanolic leaf extract from the medicinal plant Isodonternifolius (D. Don) Kudo. varies from 0.306 to 1.82, indicating that the phytocompounds are poorly permeable through Caco2. According to the US Food and Drug Administration, Papp values of <1 x 10-6cm/s and >10 x 10-6cm/s indicate poor and high permeabilities, respectively.
The intestine is the primary site for the absorption of orally administered drugs. Human intestinal absorption of a compound is one of the most important parameters to be ascertained during drug development. A molecule with less than 30% absorption is considered as poorly absorbed. The absorption percentages of all the phytocompounds under consideration through the human intestine range from 75.6 to 100%. LogKp (Skin permeability) is an important parameter for monitoring drug efficacy, particularly for the one administered through transdermal route. Log Kp value > -2.5 cm/h indicates a low skin permeability.
A molecule barely penetrates the skin if its log Kp is more than -2.5 cm/h 19. The Log Kp values of the phytocompounds in the current investigation were found to range from -4.38 to -1.21 cm/h. Out of the total 82 phytocompounds, 30 were found to have a log Kp> -2.5, indicating that they have low skin permeability. P-glycoprotein (Pgp) is a transporter protein that plays an important role in expelling molecules out of the cell. Modulation of Pgp mediated transport has significant pharmacokinetic implications for Pgp substrates, which may be exploited for specific therapeutic advantages or result in contraindications. Four out of the total 82 phytocompounds, viz. compound 24, 43, 59, 67 and 68, were Pgp substrates. A total of sixteen compounds, viz. compounds 18, 19, 38, 43, 54, 56, 57, 65, 71, 72, 74, 76, 77, 79, 80, and 82, were predicted to be the inhibitors of Pgp I. Fifteen compounds, viz. Compounds 33, 35, 37, 47, 48, 55, 58, 71, 73, 74, 76, 77, 79, 80, and 82 were predicted as inhibitors of Pgp II.
The volume of distribution (VD) is the theoretical volume that the total drug dose would need to be distributed to give the same concentration as in blood plasma. The higher the VD is, the larger the amount of a drug is distributed to tissue rather than plasma. This model is established by estimating the steady-state volume of distribution (VDss), which is then revealed as log L/kg. VDss higher than 2.81 L/kg (log VDss> 0.45) is categorized as high, whereas VDss lower than 0.71 L/kg (log VDss< -0.15) is categorized as low 20.
The pharmacokinetic parameter, Steady State Volume of Distribution (VDss), determines drug distribution within tissues. Compounds having higher VDss value are distributed more into a tissue rather than plasma. Log VDss values above 0.45 and below 0.15 are considered as high and low VDss. Eleven compounds (6, 7, 17, 23, 30, 33, 35, 53, 73, 75, and 81) were highly distributed with log Vdss values ranging between 0.462 and 0.845. And the other seventeen phytocompounds (3, 8, 9, 16, 18, 21, 39, 44, 52, 56, 60, 61, 63, 64, 66, 69, and 71) were predicted to be poorly distributed with log VDss values ranging from-0.21 to-1.775. On the other hand, the remaining phytocompounds were found to be moderately distributed. The fraction unbound (fu) is one factor determining a drug's efficacy in pharmacodynamic and pharmacokinetic analysis. Most of the drugs in plasma exist in equilibrium between an unbound state and a bound state in which the drug is bound to the serum proteins. Generally, the unbound fraction of a drug is able to diffuse between plasma and tissues and interact with the target proteins, viz., receptors, channels, and enzymes. The hepatic metabolism and glomerular filtration are also greatly influenced by fu 21.
The fraction of the unbound state of the phytocompounds ranges from 0 to 0.731. LogBB, or blood brain permeability, is an important parameter to assess a drug's side effects, toxicities, and efficacy. LogBB values of the phytocompounds range from -1.305 to 0.983. Thirty-four phytocompounds (1, 2, 5, 7, 12, 15, 17, 23, 30, 32, 33, 35, 37, 40, 41, 42, 44, 46, 47, 48, 50, 52, 53, 55, 58, 62, 72, 73, 75, 76, 78, 79, 80, and 82) out of the total of eighty-two phytocompounds were predicted to readily cross the blood brain barrier (BBB).
Only one phytocompound (21) having a LogBB value of -1.305 was found to cross the BBB membrane poorly, while the other remaining phytocompounds could diffuse moderately into the brain. LogPS (permeability surface-area product) is a commonly used descriptor of BBB permeability, which measures the initial permeability rate and considering BBB penetration, it is more appropriate and informative than logBB.
This enables a direct measurement of BBB apparent permeability, thereby eliminating serum binding effects of the compound in question. It is measured in ml/min/g of brain. It is the pharmacokinetic uptake clearance across the BBB into the brain 22.
Regarding CNS permeability, compounds with a log PS greater than -2 and less than -3 are classified as able to and unable to penetrate the CNS. The Log PS values of the phytocompounds under the present study range from -3.16 to -0.6. As the fate of a given drug is greatly influenced by its metabolism, metabolic prediction of compounds is crucial during drug discovery. The detoxification enzyme cytochrome P-450, found primarily in the liver, facilitates the excretion of xenobiotics from the body by carrying out oxidation. The cytochrome P-450 can activate or deactivate many drugs and is responsible for drug metabolism inside our body. It is important to evaluate whether the drug is a cytochrome P450 substrate or inhibitor, as the drug's pharmacokinetics may be altered dramatically by P450 inhibitors. There are two main isoforms of cytochrome, viz. P3A4 cytochrome (CYP3A4) and P2D6 cytochrome (CYP2D6) play vital roles in drug metabolism 23.
None of the phytocompounds were predicted as the substrate of CYP2D6. Thirty-five phytocompounds (18, 19, 23, 24, 27, 28, 30, 33, 35, 37, 38, 40, 43, 44, 47, 48, 50,52, 54, 55, 56, 57, 58, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 81 and 82) out of the total eighty-two phytocompounds were found to be CYP3A4 substrate. And twenty-five phytocompounds (1, 5, 6, 7, 17, 20, 23, 27, 30, 32, 33, 35, 37, 40, 41, 42, 47, 48, 50, 52, 55, 58, 73, 75 and 81) were CYP1A2 inhibitors.
Out of the total phytocompounds, four (27, 54, 75 and 81) were predicted as CYP2C19 inhibitors. Only one compound (75) was found to be CYP2C9 inhibitor. None of the compounds were predicted as the inhibitors of CYP2D6 and CYP3A4. OCT2 or organic cation transporter 2 plays an important role in disposition and renal clearance of drugs and endogenous compounds.
The excretion profiles of all the phytocompounds were predicted based on total clearance, which is a combination of hepatic and renal clearance. Total clearance of all the phytocompounds ranges from -8.021 to 2.217 log mL/min/kg. Compound numbers 71 and 4 showed the highest and lowest total clearance of the phytocompounds.
Only five compounds (19, 57, 65, 72 and 76) were predicted to be the substrate of OCT2 or organic cation transporter 2. The characteristics regarding the metabolism and excretion of the compounds are given in Table 8.
TABLE 8: METABOLISM AND EXCRETION CHARACTERISTICS OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT FROM THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Metabolism | Excretion | ||||||||
Com.
no. |
CYP2D6 substrate | CYP3A4 substrate | CYP1A2 inhibitior | CYP2C19 inhibitior | CYP2C9 inhibitior | CYP2D6 inhibitior | CYP3A4 inhibitior | Total Clearance
(log ml/min/kg) |
Renal OCT2 substrate |
1 | No | No | Yes | No | No | No | No | 0.203 | No |
2 | No | No | No | No | No | No | No | 0.26 | No |
3 | No | No | No | No | No | No | No | 0.734 | No |
4 | No | No | No | No | No | No | No | -8.021 | No |
5 | No | No | Yes | No | No | No | No | 0.311 | No |
6 | No | No | Yes | No | No | No | No | 0.052 | No |
7 | No | No | Yes | No | No | No | No | 1.243 | No |
8 | No | No | No | No | No | No | No | 0.929 | No |
9 | No | No | No | No | No | No | No | 0.807 | No |
10 | No | No | No | No | No | No | No | 0.453 | No |
11 | No | No | No | No | No | No | No | 0.173 | No |
12 | No | No | Yes | No | No | No | No | 0.232 | No |
13 | No | No | No | No | No | No | No | 0.156 | No |
14 | No | No | No | No | No | No | No | 0.159 | No |
15 | No | No | No | No | No | No | No | 0.271 | No |
16 | No | No | No | No | No | No | No | 0.788 | No |
17 | No | No | Yes | No | No | No | No | 0.406 | No |
18 | No | Yes | No | No | No | No | No | 0.707 | No |
19 | No | Yes | No | No | No | No | No | 1.238 | Yes |
20 | No | No | Yes | No | No | No | No | 0.22 | No |
21 | No | No | No | No | No | No | No | 1.236 | No |
22 | No | No | No | No | No | No | No | 1.237 | No |
23 | No | Yes | Yes | No | No | No | No | 0.262 | No |
24 | No | Yes | No | No | No | No | No | 0.519 | No |
25 | No | No | No | No | No | No | No | 0.095 | No |
26 | No | No | Yes | No | No | No | No | 0.233 | No |
27 | No | Yes | Yes | Yes | No | No | No | 0.417 | No |
28 | No | Yes | No | No | No | No | No | 0.703 | No |
29 | No | No | No | No | No | No | No | 0.571 | No |
30 | No | Yes | Yes | No | No | No | No | 1.101 | No |
31 | No | No | No | No | No | No | No | 1.097 | No |
32 | No | No | Yes | No | No | No | No | 0.368 | No |
33 | No | Yes | Yes | No | No | No | No | 1.764 | No |
34 | No | No | No | No | No | No | No | 0.706 | No |
35 | No | Yes | Yes | No | No | No | No | 1.686 | No |
36 | No | No | No | No | No | No | No | 1.387 | No |
37 | No | Yes | Yes | No | No | No | No | 0.467 | No |
38 | No | Yes | No | No | No | No | No | 2.184 | No |
39 | No | No | No | No | No | No | No | 0.484 | No |
40 | No | Yes | Yes | No | No | No | No | 1.861 | No |
41 | No | No | Yes | No | No | No | No | 0.302 | No |
42 | No | No | Yes | No | No | No | No | 0.343 | No |
43 | No | Yes | No | No | No | No | No | 0.622 | No |
44 | No | Yes | No | No | No | No | No | 1.763 | No |
45 | No | No | No | No | No | No | No | 1.207 | No |
46 | No | No | No | No | No | No | No | 1.348 | No |
47 | No | Yes | Yes | No | No | No | No | 2.032 | No |
48 | No | Yes | Yes | No | No | No | No | 2.086 | No |
49 | No | No | No | No | No | No | No | 1.738 | No |
50 | No | Yes | Yes | No | No | No | No | 1.791 | No |
51 | No | No | No | No | No | No | No | 1.227 | No |
52 | No | Yes | Yes | No | No | No | No | 1.832 | No |
53 | No | No | No | No | No | No | No | 1.844 | No |
54 | No | Yes | No | Yes | No | No | No | 0.629 | No |
55 | No | Yes | Yes | No | No | No | No | 1.684 | No |
56 | No | Yes | No | No | No | No | No | 0.686 | No |
57 | No | Yes | No | No | No | No | No | 1.652 | Yes |
58 | No | Yes | Yes | No | No | No | No | 2.005 | No |
59 | No | No | No | No | No | No | No | -0.07 | No |
60 | No | No | No | No | No | No | No | 0.466 | No |
61 | No | No | No | No | No | No | No | 0.897 | No |
62 | No | No | No | No | No | No | No | 0.394 | No |
63 | No | No | No | No | No | No | No | 1.516 | No |
64 | No | No | No | No | No | No | No | 0.785 | No |
65 | No | No | No | No | No | No | No | 1.569 | Yes |
66 | No | No | No | No | No | No | No | 1.51 | No |
67 | No | No | No | No | No | No | No | 0.143 | No |
68 | No | No | No | No | No | No | No | 0.558 | No |
69 | No | No | No | No | No | No | No | 0.682 | No |
70 | No | No | No | No | No | No | No | 0.424 | No |
71 | No | Yes | No | No | No | No | No | 2.217 | No |
72 | No | Yes | No | No | No | No | No | 0.525 | Yes |
73 | No | Yes | Yes | No | No | No | No | 1.703 | No |
74 | No | Yes | No | No | No | No | No | 0.548 | No |
75 | No | Yes | Yes | Yes | Yes | No | No | 0.852 | No |
76 | No | Yes | No | No | No | No | No | 0.415 | Yes |
77 | No | Yes | No | No | No | No | No | 0.392 | No |
78 | No | Yes | No | No | No | No | No | 0.921 | No |
79 | No | Yes | No | No | No | No | No | 0.572 | No |
80 | No | Yes | No | No | No | No | No | 0.618 | No |
81 | No | Yes | Yes | Yes | No | No | No | 0.837 | No |
82 | No | Yes | No | No | No | No | No | 0.628 | No |
Assessment of the toxicity of compounds is also an important step in the process of drug discovery 24. Therefore, the toxicity profile of all the phytocompounds under consideration was assessed, and the values are given in Table 9.
TABLE 9: TOXICITY PROFILING OF THE PHYTOCOMPOUNDS FROM THE AQUEOUS METHANOLIC LEAF EXTRACT OF THE MEDICINAL PLANT ISODONTERNIFOLIUS (D. DON) KUDO
Toxicity | ||||||||||
Com.
no. |
AMES toxicity | Max. tolerated dose (human) (log mg/kg/ day) | hERG I inhibitor | hERG II inhibitor | LD50
(mol/kg) |
LOAEL
(log mg/kg_bw/day) |
Hepatot-oxicity | Skin Sensiti-sation | T.Pyriformis toxicity
(log µg/L ) |
Minnow toxicity (log mM) |
1 | No | 0.876 | No | No | 1.88 | 1.944 | No | Yes | 0.665 | 1.605 |
2 | Yes | 0.907 | No | No | 1.887 | 1.907 | No | Yes | 0.236 | 1.59 |
3 | No | 1.076 | No | No | 1.851 | 2.379 | No | Yes | -0.709 | 2.321 |
4 | Yes | 0.429 | No | No | 2.482 | 3.388 | No | No | 0.285 | 6.485 |
5 | Yes | 1.048 | No | No | 1.92 | 2.09 | No | Yes | 0.875 | 0.714 |
6 | No | 0.48 | No | No | 1.797 | 2.317 | No | No | 0.652 | 1.193 |
7 | No | -0.04 | No | No | 1.56 | 2.46 | No | No | 1.09 | 0.542 |
8 | No | 0.973 | No | No | 2.737 | 2.462 | No | Yes | -0.367 | 2.204 |
9 | No | 0.87 | No | No | 1.867 | 2.553 | No | Yes | -0.197 | 1.849 |
10 | No | 0.851 | No | No | 1.726 | 2.413 | Yes | No | 0.422 | 1.281 |
11 | No | 0.338 | No | No | 1.715 | 2.218 | No | Yes | 0.512 | 1.595 |
12 | No | 0.223 | No | No | 1.382 | 2.28 | No | No | 1.09 | 0.644 |
13 | No | 0.527 | No | No | 2.06 | 2.314 | No | Yes | 0.041 | 1.882 |
14 | No | 0.851 | No | No | 1.67 | 2.343 | No | Yes | 0.329 | 1.682 |
15 | No | 0.573 | No | No | 1.653 | 2.082 | No | Yes | 0.708 | 1.024 |
16 | No | 1.057 | No | No | 1.967 | 2.234 | No | Yes | -0.248 | 2.074 |
17 | No | 0.934 | No | No | 2.086 | 1.26 | No | Yes | 1.057 | 0.865 |
18 | No | 0.645 | No | No | 2.329 | 1.844 | No | No | 0.883 | -0.038 |
19 | No | 0.046 | No | No | 1.975 | 1.701 | No | No | 1.156 | 1.473 |
20 | Yes | 0.809 | No | No | 1.857 | 1.775 | No | Yes | 0.527 | 1.822 |
21 | No | 0.772 | No | No | 3.056 | 1.119 | No | No | 0.255 | 4.36 |
22 | No | 0.567 | No | No | 1.911 | 1.9 | No | Yes | 0.663 | 1.763 |
23 | No | 0.797 | No | No | 1.781 | 1.2 | No | Yes | 2.059 | -0.414 |
24 | No | -0.683 | No | No | 2.091 | 1.362 | Yes | No | 0.315 | 1.138 |
25 | No | 0.544 | No | No | 1.759 | 1.94 | No | Yes | 0.482 | 1.354 |
26 | No | 1.338 | No | No | 2.029 | 1.884 | No | No | 0.385 | 2.066 |
27 | No | 0.913 | No | No | 2.193 | 1.68 | No | No | 1.028 | -0.023 |
28 | No | -0.162 | No | No | 1.763 | 1.553 | No | No | 0.672 | 1.556 |
29 | No | 1.069 | No | No | 2.313 | 2.295 | Yes | No | -0.629 | 2.283 |
30 | No | 0.947 | No | No | 2.019 | 1.199 | No | Yes | 2.091 | -0.848 |
31 | No | 0.979 | No | No | 1.713 | 2.494 | No | Yes | -0.394 | 2.169 |
32 | No | 1.169 | No | No | 1.896 | 1.465 | No | Yes | 1.186 | 0.419 |
33 | No | 0.272 | No | Yes | 1.473 | 1.158 | No | Yes | 1.65 | -2.039 |
34 | No | 0.618 | No | No | 1.785 | 2.163 | No | Yes | 1.18 | 0.974 |
35 | No | 0.05 | No | Yes | 1.607 | 1.043 | No | Yes | 1.884 | -1.504 |
36 | No | 0.643 | No | No | 2.209 | 1.139 | No | Yes | 1.128 | 1.085 |
37 | No | -0.258 | No | No | 1.189 | 1.598 | No | Yes | 1.274 | 0.075 |
38 | No | 0.328 | No | No | 1.83 | 0.507 | No | No | 0.477 | -0.835 |
39 | No | 0.859 | No | No | 1.748 | 2.126 | No | Yes | 0.377 | 1.328 |
40 | No | 0.178 | No | No | 1.635 | 2.998 | No | Yes | 1.935 | -1.373 |
41 | No | 1.102 | No | No | 1.771 | 2.222 | No | Yes | 1.823 | -0.596 |
42 | No | 1.324 | No | No | 1.584 | 2.451 | No | Yes | 1.276 | 0.408 |
43 | Yes | -0.661 | No | No | 3.797 | 2.292 | No | No | 0.288 | 3.47 |
44 | No | -0.708 | No | No | 1.44 | 3.181 | No | Yes | 0.84 | -1.083 |
45 | No | 0.747 | No | No | 1.823 | 2.04 | No | Yes | 0.877 | 1.335 |
46 | No | 0.33 | No | No | 1.673 | 1.335 | No | Yes | 1.19 | 0.62 |
47 | No | -0.019 | No | No | 1.617 | 3.004 | No | Yes | 1.603 | -1.6 |
48 | No | -0.078 | No | No | 1.596 | 2.932 | No | Yes | 1.668 | -1.473 |
49 | No | 0.522 | No | No | 1.6 | 2.191 | No | Yes | 1.427 | 0.557 |
50 | No | 0.028 | No | No | 1.437 | 1.232 | No | Yes | 2.316 | -0.075 |
51 | No | 0.76 | No | No | 2.155 | 2.002 | Yes | Yes | -0.388 | 1.825 |
52 | No | -0.791 | No | No | 1.406 | 3.33 | No | Yes | 0.65 | -1.565 |
53 | No | 0.292 | No | No | 1.485 | 2.658 | No | Yes | 1.834 | -0.204 |
54 | No | -0.808 | No | No | 1.829 | 1.75 | No | No | 1.022 | 0.124 |
55 | No | 0.094 | No | No | 1.664 | 2.929 | No | Yes | 1.604 | -2.113 |
56 | No | 0.417 | No | No | 1.784 | 0.801 | No | No | 0.374 | 1.283 |
57 | No | 0.164 | No | No | 1.607 | 2.351 | No | Yes | 2.09 | -1.287 |
58 | No | 0.199 | No | No | 1.581 | 2.852 | No | Yes | 1.394 | -1.23 |
59 | Yes | 0.324 | No | No | 2.482 | 4.008 | No | No | 0.285 | 4.367 |
60 | No | 0.744 | No | No | 2.146 | 1.473 | No | No | 0.632 | 2.189 |
61 | No | 0.725 | No | No | 1.765 | 2.679 | No | No | 0.102 | 1.922 |
62 | No | 0.889 | No | No | 1.675 | 2.182 | No | Yes | 0.452 | 0.856 |
63 | No | 0.1 | No | No | 1.54 | 2.68 | No | Yes | 0.499 | 0.762 |
64 | Yes | 0.852 | No | No | 2.175 | 0.852 | No | Yes | -0.709 | 2.923 |
65 | No | 0.712 | No | No | 1.616 | 2.174 | No | No | 1.116 | 0.165 |
66 | Yes | 0.504 | No | No | 2.636 | 0.991 | No | No | -0.326 | 1.895 |
67 | No | 1.038 | No | No | 1.921 | 1.82 | No | Yes | -0.526 | 2.098 |
68 | No | 0.778 | No | No | 1.739 | 2.34 | No | No | 0.809 | 1.309 |
69 | No | 0.582 | No | No | 1.449 | 2.165 | No | No | 0.281 | 2.378 |
70 | No | 0.85 | No | No | 1.815 | 2.011 | No | Yes | 0.157 | 1.249 |
71 | No | -0.005 | No | No | 1.593 | 2.656 | No | Yes | 0.562 | -0.587 |
72 | No | -0.734 | No | No | 1.978 | 1.598 | No | No | 0.618 | 0.778 |
73 | No | -0.407 | No | Yes | 1.707 | 0.914 | No | Yes | 1.682 | -1.411 |
74 | No | -0.89 | No | No | 1.851 | 1.749 | No | No | 0.995 | -0.035 |
75 | No | -0.607 | No | Yes | 1.841 | 1.183 | Yes | No | 1.619 | -0.139 |
76 | No | -0.499 | No | No | 2.035 | 1.297 | No | No | 0.597 | 0.428 |
77 | No | -0.302 | No | No | 1.705 | 1.956 | No | No | 0.504 | -1.311 |
78 | No | 0.068 | No | No | 1.728 | 1.196 | No | Yes | 1.399 | 0.714 |
79 | No | -0.458 | No | Yes | 2.08 | 0.892 | No | No | 0.631 | -1.94 |
80 | No | -0.664 | No | Yes | 2.54 | 0.872 | No | No | 0.433 | -1.675 |
81 | No | -0.036 | No | No | 1.666 | 1.254 | No | Yes | 1.363 | 0.851 |
82 | No | -0.621 | No | Yes | 2.552 | 0.855 | No | No | 0.43 | -1.802 |
By the toxicity analysis of the phytocompounds by pkCSM, eight phytocompounds (2, 4, 5, 20, 43, 59, 64 and 66) were predicted to be mutagenic as per AMES test result. The toxic dose threshold of the phytocompounds in humans was also estimated based on maximum recommended tolerated dose (MRTD). MRTD is considered as low and high if it is less than or equal to 0.477 log (mg/kg/day) and greater than 0.477 log (mg/kg/day). From the analysis, MRTD of the phytocompounds under investigation was found to range from -0.89 to 1.338 log (mg/kg/day).
More than 53% of the phytocompounds i.e, forty four phytocompounds (1, 2, 3, 5, 6, 8, 9, 10, 13, 14, 15, 16, 17, 18, 20, 21, 22, 23, 25, 26, 27, 29, 30, 31, 32, 34, 36, 39, 41, 42, 45, 49, 51, 60, 61, 62, 64, 65, 66, 67, 68, 69, 70 and 74) were predicted to have high MRTD. All the phytocompounds were not inhibitors of Herg I. Only seven phytocompounds of the total identified phytocompounds (33, 35, 73, 75, 79, 80 and 82) were predicted as inhibitors of heRG II. LD50 or lethal dosage values are a standard measurement of acute toxicity and are used to assess the relative toxicity of different molecules. The LD50 values of the phyto-compounds range from 1.406 to 3.797mol/kg. The predicted lowest dose of a compound observed adverse effect (LOAEL) values of the phytocompounds under study range from log 0.507 to 4.008 log mg/kgbw/day. Regarding hepato-toxicity of the phytocompounds under study, only five phytocompounds (10, 24, 29, 51 and 75) were predicted as hepatotoxic. Fifty phytocompounds among the phytocompounds under study were predicted to be associated with skin sensitization. From the toxicity analysis, T. pyriformis toxicity values of the phytocompounds were found to range from -0.709 to 2.316log µg/L.
T. pyriformis toxicity values greater than -0.5 log µg/L is considered as toxic. Except for three phytocompounds (Nos. 3, 64 and 67) all other phytocompounds were found to have pIGC50 (negative logarithm of the concentration required to inhibit 50% growth in log µg/L) values greater than -0.5 log µg/L indicating that they have antibacterial property. LC50 (lethal concentration) values of all the phytocompounds were also evaluated. LC50 value is the compound concentration necessary to cause the death of 50% of the Flathead Minnows. Thirty-two phytocompounds (18, 23, 27, 30, 32, 33, 35, 37, 38, 40, 41, 42, 44, 47, 48, 50, 52, 53, 54, 55, 57, 58, 65, 71, 73, 74, 75, 76, 77, 79, 80 and 82) among the total eighty-two phytocompounds were predicted as high or acute toxic compounds as their LC50 values fall below 0.5mM.
CONCLUSION: In the present study, eighty-two (82) different phytocompounds were identified in the methanolic extract from the medicinal plant leaf, Isodon ternifolius (D. Don) Kudo by GC-MS analysis.
The physicochemical properties of all the phytocompounds were predicted using the SwissADME web tool, and their ADMET properties were also predicted using the pkCSM online server tool. Out of the phytocompounds, twenty-five were found to follow all the five drug-likeness rules, viz., Lipinski, Ghose, Veber, Egen, and Muegge. These results may be useful in further in-vitro and in-vivo experimentation that might lead to the discovery of drugs from the concerned traditional medicinal plant.
ACKNOWLEDGEMENT: We gratefully acknowledge the award of University Fellowship to Gopeshor Singh Yumnam by Manipur University.
CONFLICTS OF INTEREST: Nil
REFERENCES:
- Fatemeh Jamshidi-Kia, Zahra Lorigooini and Hossein Amini-Khoei: Medicinal plants: Past history and future perspective. Journal of Herbmed Pharmacology 2018; 7(1): 1-7.
- Sunil Mathur and Clare Hoskins: Drug development: Lessons from nature (Review). Biomedical Reports 2017; 6: 612-614.
- Veronique Seidel: Plant-Derived Chemicals: A Source of Inspiration for New Drugs. Plants 2020; 9(11): 1562.
- Taylor JLS, Rabe T, McGaw LJ, Jäger AK & van Staden J: Towards the scientific validation of traditional medicinal plants. Plant Growth Regulation 2001; 34: 23-37.
- Ernst E: Harmless Herbs? A Review of the Recent Literature. The American Journal of Medicine 1998; 104(2): 170–178.
- Velmurugan G and Anand SP: GC-MS analysis of bioactive compounds on ethanolic leaf extract of Phyllodium pulchellum L. Desv. International Journal of Pharmacognosy and Phytochemical Research 2017; 9(1): 114-118.
- Monika, Dhruv Mishra, PS. Bisht and Preeti Chaturvedi: Medicinal Uses of Traditionally Used Plants in Bhatwari Block, District Uttarkashi, Uttarakhand, India. Journal of Scientific Research 2020; 64(01): 119-126.
- Yeshi K, Crayn D, Ritmejerytė E & Wangchuk P: Plant Secondary Metabolites Produced in Response to Abiotic Stresses Has Potential Application in Pharmaceutical Product Development. Molecules 2022; 27(1): 313.
- Phi-Hung: N. PTP1B inhibitors from isodonternifolius collected in vietnam. Vietnam Journal of Science and Technology 2020; 58(5): 533.
- Sonia NS and Jessykutty PC: Drying technologies for good quality crude drug production of medicinal plants – A review. International Journal of Medicine and Pharmaceutical Sciences 2016; 6(2): 59-72.
- Ilham Bano and Deora GS: Preliminary phytochemical screening and GC- MS analysis for identification of compounds from Abutilon frutcosumGuill and Perr. A rare and endemic plant of Indian Thar Desert. International Journal of Pharmaceutical Sciences and Research 2020; 11(6): 2671-2679.
- Shettima AY, Kurumi Y, Sodipo OA, Usman H and Tijjani MA: Gas Chromatography-Mass Spectrometry (GC-MS) Analysis of Bioactive Components of Ethyl acetate Root Extract of Guiera senegalensis J. F. Gmel. Journal of Applied Pharmaceutical Science 2013; 3 (03): 146-150.
- Ranjith D and Ravikumar C: SwissADME predictions of pharmacokinetics and drug-likeness properties of small molecules present in Ipomoea mauritiana Jacq. Journal of Pharmacognosy and Phytochemistry 2019; 8(5): 2063-2073.
- Alif FirmanFirdausy, RoihatulMutiah and Eka Karti Rahmawati. Predicting pharmacokinetic profiles of sunflower’s (Helianthus annuus L.) activecompoundsusing in-silco approach. J of Islamic medicine 2020; 4(1): 1-7.
- Tsolanku Sidney Maliehe, Phakamani Hopewell Tsilo and Jabulani Siyabonga Shandu: Computational evaluation of ADMET properties and bioactive score of compounds from Encephalartos ferox. Pharmacognn. J 2020; 12(6): 1357-1362.
- Daina A, Michielin O and Zoete V: SwissADME: A free web tool to evaluate pharmacokinetics, drug-likeness and medicinal chemistry friendliness of small molecules. Scientific Reports 2017; 7(1): 42717.
- Ranjith D and Ravikumar C: Swissadme ADME predictions of pharmacokinetics and drug likeness properties of small molecules presentin Ipomoeamauritiana Jacq. Journal of pharmacognosy and phytochemistry 2019; 8(5): 2063-2073.
- El Kattan A and Varma M: Oral absorption, intestinal metabolism and human oral bioavailability. Topics on Drug Metabolism 2012; 10: 310-87.
- Pires DE, Blundell TL and Ascher DB: pkCSM: Predicting Smallmolecule Pharmacokinetic and Toxicity Properties using Graph-based Signatures. J Med Chem 2015; 58(9): 4066-4072.
- Wahyuningsih D, Purnomo Y & Tilaqza A: In-silico Study of Pulutan (Urena lobata) Leaf Extract as Anti Inflammation and their ADME Prediction. Journal of Tropical Pharmacy and Chemistry 2022; 6(1): 30–37.
- Watanabe R, Esaki T, Kawashima H, Natsume-Kitatani Y, Nagao C, Ohashi R & Mizuguchi K: Predicting Fraction Unbound in Human Plasma from Chemical Structure: Improved Accuracy in the Low Value Ranges. Molecular Pharmaceutics 2018; 15(11): 5302–5311.
- Carpenter TS, Kirshner DA, Lau EY, Wong SE, Nilmeier JP & Lightstone FC: A Method to Predict Blood-Brain Barrier Permeability of Drug-Like Compounds Using Molecular Dynamics Simulations. Biophysical Journal 2014; 107(3): 630–641.
- Sayada Reemsha Kazmi, Ren Jun, Myeong-Sang Yu, Chanjin Jung and Dokyun Na: In-silico approaches and tools for the prediction of drug metabolism and fate: A review. Comp in Biology and Medicine 2019; 106: 54–64.
- Hemmerich J and Ecker GF: In-silico toxicology: From structure–activity relationships towards deep learning and adverse outcome pathways. Wiley Interdisciplinary Reviews: Computational Molecular Science 2020; 10: 1-23.
How to cite this article:
Yumnam GS, Sanjenbam KD, Hijam KD, Shamjetshabam BC, Meinam L, Wayenbam SS, Sanjenbam K and Laishram RS: GC-MS analysis and in-silico admet analysis of the aqueous methanol leaf extract of isodon ternifolius (D. DON) Kudo. Int J Pharm Sci & Res 2023; 14(6): 3166-95. doi: 10.13040/IJPSR.0975-8232.14(6).3166-95.
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Article Information
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IJPSR
Gopeshor Singh Yumnam, Kunjeshwori Devi Sanjenbam *, Kiranbala Devi Hijam, Babeeta Chanu Shamjetshabam, Langlen Meinam, Sobhachandra Singh Wayenbam, Kabita Sanjenbam and Rupachandra Singh Laishram
Laboratory of Protein Biochemistry, Department of Biochemistry, Manipur University, Canchipur, Imphal, India.
kdsanjenbam@yahoo.com
12 October 2022
24 May 2023
24 November 2022
10.13040/IJPSR.0975-8232.14(6).3166-95
01 June 2023